Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   SPYM18_RS01815 Genome accession   NC_003485
Coordinates   332532..332714 (+) Length   60 a.a.
NCBI ID   WP_011017399.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS8232     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 327532..337714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM18_RS01780 (spyM18_0387) - 328528..328956 (+) 429 WP_002988448.1 DUF1617 family protein -
  SPYM18_RS01785 (spyM18_0388) - 328959..329591 (+) 633 WP_011017396.1 hypothetical protein -
  SPYM18_RS01790 (spyM18_0389) - 329603..329875 (+) 273 WP_011017397.1 DUF7365 family protein -
  SPYM18_RS01795 (spyM18_0390) - 329872..330099 (+) 228 WP_003058873.1 phage holin -
  SPYM18_RS01805 (spyM18_0391) - 330218..331435 (+) 1218 WP_011017398.1 peptidoglycan amidohydrolase family protein -
  SPYM18_RS01810 (spyM18_0393) speA 331557..332312 (-) 756 WP_009880239.1 streptococcal pyrogenic exotoxin SpeA -
  SPYM18_RS01815 (spyM18_0394) prx 332532..332714 (+) 183 WP_011017399.1 hypothetical protein Regulator
  SPYM18_RS01820 (spyM18_0396) - 333023..333625 (+) 603 WP_011017400.1 hypothetical protein -
  SPYM18_RS01825 (spyM18_0398) murC 333665..334993 (+) 1329 WP_011017401.1 UDP-N-acetylmuramate--L-alanine ligase -
  SPYM18_RS01830 (spyM18_0399) - 335039..335521 (+) 483 WP_002985926.1 GNAT family N-acetyltransferase -
  SPYM18_RS01835 (spyM18_0401) mltG 335633..337207 (+) 1575 WP_011184194.1 endolytic transglycosylase MltG -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6989.07 Da        Isoelectric Point: 4.3094

>NTDB_id=22556 SPYM18_RS01815 WP_011017399.1 332532..332714(+) (prx) [Streptococcus pyogenes MGAS8232]
MLYIDEFKEAIDKGYILGDTVAIVRKNGKIFDYVLPGEGVRPWEVLTEEKVEEVMRELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=22556 SPYM18_RS01815 WP_011017399.1 332532..332714(+) (prx) [Streptococcus pyogenes MGAS8232]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAGGGGTATATTTTAGGTGACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCAGGAGAGGGAGTCAGGCCATGGGAGGTGTTGACAGAGGAAAAAGTGGAAGAAG
TGATGAGGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

71.667

100

0.717

  prx Streptococcus pyogenes MGAS8232

70

100

0.7

  prx Streptococcus pyogenes MGAS315

95.122

68.333

0.65

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517


Multiple sequence alignment