Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   B7P25_RS10325 Genome accession   NZ_CP020723
Coordinates   1917063..1917350 (+) Length   95 a.a.
NCBI ID   WP_000648331.1    Uniprot ID   A0A2A8KZX2
Organism   Bacillus thuringiensis strain BM-BT15426     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1912063..1922350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7P25_RS10315 (B7P25_10290) - 1913522..1914829 (+) 1308 WP_061536210.1 hypothetical protein -
  B7P25_RS10320 (B7P25_10295) - 1915066..1916946 (+) 1881 WP_001990338.1 FtsX-like permease family protein -
  B7P25_RS10325 (B7P25_10300) abrB 1917063..1917350 (+) 288 WP_000648331.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  B7P25_RS10330 (B7P25_10305) - 1917625..1918575 (+) 951 WP_001089035.1 serine protease -
  B7P25_RS10335 (B7P25_10310) - 1918616..1918924 (-) 309 WP_001259894.1 ArsR/SmtB family transcription factor -
  B7P25_RS10340 (B7P25_10315) - 1919032..1919967 (+) 936 WP_087931643.1 aldo/keto reductase -
  B7P25_RS10345 (B7P25_10320) - 1920016..1921191 (+) 1176 WP_087931644.1 MFS transporter -
  B7P25_RS10350 (B7P25_10325) - 1921380..1921604 (-) 225 WP_000162601.1 hypothetical protein -
  B7P25_RS10355 (B7P25_10330) - 1921689..1922036 (-) 348 WP_000426313.1 DUF4257 domain-containing protein -

Sequence

Protein


Download         Length: 95 a.a.        Molecular weight: 10645.40 Da        Isoelectric Point: 6.3179

>NTDB_id=225548 B7P25_RS10325 WP_000648331.1 1917063..1917350(+) (abrB) [Bacillus thuringiensis strain BM-BT15426]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEV

Nucleotide


Download         Length: 288 bp        

>NTDB_id=225548 B7P25_RS10325 WP_000648331.1 1917063..1917350(+) (abrB) [Bacillus thuringiensis strain BM-BT15426]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGTTTAG

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-49)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

54.444

94.737

0.516

Multiple sequence alignment