Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | B7473_RS03340 | Genome accession | NZ_CP020713 |
| Coordinates | 644983..645282 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain K17 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 639983..650282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7473_RS03315 (B7473_03320) | gcvPA | 641195..642541 (-) | 1347 | WP_000019690.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| B7473_RS03320 (B7473_03325) | gcvT | 642561..643652 (-) | 1092 | WP_000093348.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| B7473_RS03325 (B7473_03330) | - | 643811..644335 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| B7473_RS03330 (B7473_03335) | - | 644325..644471 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| B7473_RS03335 (B7473_03340) | comGF | 644568..645065 (-) | 498 | WP_029694050.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| B7473_RS03340 (B7473_03345) | comGE | 644983..645282 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| B7473_RS03345 (B7473_03350) | comGD | 645269..645715 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| B7473_RS03350 (B7473_03355) | comGC | 645693..646004 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| B7473_RS03355 (B7473_03360) | comGB | 646018..647088 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| B7473_RS03360 (B7473_03365) | comGA | 647060..648034 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| B7473_RS03365 (B7473_03370) | - | 648086..648709 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| B7473_RS03370 (B7473_03375) | - | 648706..649035 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| B7473_RS03375 (B7473_03380) | - | 649035..650021 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| B7473_RS03380 (B7473_03385) | - | 650018..650221 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=225444 B7473_RS03340 WP_000844413.1 644983..645282(-) (comGE) [Staphylococcus aureus strain K17]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=225444 B7473_RS03340 WP_000844413.1 644983..645282(-) (comGE) [Staphylococcus aureus strain K17]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |