Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | Aba810CP_RS03200 | Genome accession | NZ_CP026338 |
| Coordinates | 653586..654101 (-) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain 810CP | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 648586..659101
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba810CP_RS03175 (Aba810CP_03175) | - | 649133..650776 (+) | 1644 | WP_000281764.1 | nitrite/sulfite reductase | - |
| Aba810CP_RS03180 (Aba810CP_03180) | - | 650769..651254 (+) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| Aba810CP_RS03185 (Aba810CP_03185) | - | 651336..651689 (+) | 354 | WP_000457786.1 | DMT family transporter | - |
| Aba810CP_RS03190 (Aba810CP_03190) | - | 651732..652175 (-) | 444 | WP_001176580.1 | VOC family protein | - |
| Aba810CP_RS03195 (Aba810CP_03195) | - | 652302..653477 (-) | 1176 | WP_000129964.1 | thiolase family protein | - |
| Aba810CP_RS03200 (Aba810CP_03200) | fimT | 653586..654101 (-) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| Aba810CP_RS03205 (Aba810CP_03205) | omp38 | 654483..655553 (+) | 1071 | WP_000777880.1 | outer membrane protein Omp38 | - |
| Aba810CP_RS20080 | - | 655678..655821 (-) | 144 | WP_162138624.1 | hypothetical protein | - |
| Aba810CP_RS03215 (Aba810CP_03215) | - | 655840..657045 (-) | 1206 | WP_000354412.1 | RtcB family protein | - |
| Aba810CP_RS03220 (Aba810CP_03220) | - | 657322..658782 (-) | 1461 | WP_000004971.1 | amino acid permease | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=225372 Aba810CP_RS03200 WP_000477151.1 653586..654101(-) (fimT) [Acinetobacter baumannii strain 810CP]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=225372 Aba810CP_RS03200 WP_000477151.1 653586..654101(-) (fimT) [Acinetobacter baumannii strain 810CP]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGACATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGACATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |