Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | B6N58_RS02390 | Genome accession | NZ_CP020614 |
| Coordinates | 514376..515440 (+) | Length | 354 a.a. |
| NCBI ID | WP_045100155.1 | Uniprot ID | A0A098GHQ6 |
| Organism | Legionella micdadei strain NZ2015 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 509376..520440
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6N58_RS02365 (B6N58_02365) | - | 509442..510389 (-) | 948 | WP_045100159.1 | type IV secretion system DotC family protein | - |
| B6N58_RS02370 (B6N58_02370) | dotD | 510370..510819 (-) | 450 | WP_349267108.1 | type IVB secretion system lipoprotein DotD | - |
| B6N58_RS02375 (B6N58_02375) | rsmD | 511122..511673 (-) | 552 | WP_045100157.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| B6N58_RS02380 (B6N58_02380) | - | 511670..512995 (-) | 1326 | WP_082050751.1 | pitrilysin family protein | - |
| B6N58_RS02385 (B6N58_02385) | - | 512992..514314 (-) | 1323 | WP_045100156.1 | pitrilysin family protein | - |
| B6N58_RS02390 (B6N58_02390) | pilA | 514376..515440 (+) | 1065 | WP_045100155.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| B6N58_RS02395 (B6N58_02395) | ftsE | 515433..516083 (+) | 651 | WP_058393236.1 | cell division ATP-binding protein FtsE | - |
| B6N58_RS02400 (B6N58_02400) | ftsX | 516077..517006 (+) | 930 | WP_045100154.1 | permease-like cell division protein FtsX | - |
| B6N58_RS02405 (B6N58_02405) | rpoH | 517067..517927 (+) | 861 | WP_045100153.1 | RNA polymerase sigma factor RpoH | - |
| B6N58_RS02415 (B6N58_02415) | - | 518532..519509 (-) | 978 | WP_045100151.1 | adenosine deaminase | - |
| B6N58_RS02420 (B6N58_02420) | - | 519619..519804 (+) | 186 | WP_045100150.1 | CBU_0585 family protein | - |
Sequence
Protein
Download Length: 354 a.a. Molecular weight: 38794.45 Da Isoelectric Point: 6.7747
>NTDB_id=224953 B6N58_RS02390 WP_045100155.1 514376..515440(+) (pilA) [Legionella micdadei strain NZ2015]
MIKWFKRNQGETKPEEPLVEVSPVLTEEQHYEDKLAHSPAPSDESPKQGFFARIKRGLTKTRQQFGEGIGRLLLGKKEID
ASLLEELELVLLGADLGVETSQSILKQLGEGLARKQLTDGNAVFQELKRRLEAILLTSEKPLQLENPDKSPFVILTVGVN
GAGKTTSIGKMAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQHTGADSASVIYDALQAAKARNIDILIAD
TAGRLHTQGNLMEELKKVKRVLQKLDANAPHETMLILDASIGQNALNQARQFHQSIGVTGITMTKLDGTAKGGILFAIAN
ELGIPFRYLGVGEGIDDLRPFDAQQFVRAIFNDD
MIKWFKRNQGETKPEEPLVEVSPVLTEEQHYEDKLAHSPAPSDESPKQGFFARIKRGLTKTRQQFGEGIGRLLLGKKEID
ASLLEELELVLLGADLGVETSQSILKQLGEGLARKQLTDGNAVFQELKRRLEAILLTSEKPLQLENPDKSPFVILTVGVN
GAGKTTSIGKMAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQHTGADSASVIYDALQAAKARNIDILIAD
TAGRLHTQGNLMEELKKVKRVLQKLDANAPHETMLILDASIGQNALNQARQFHQSIGVTGITMTKLDGTAKGGILFAIAN
ELGIPFRYLGVGEGIDDLRPFDAQQFVRAIFNDD
Nucleotide
Download Length: 1065 bp
>NTDB_id=224953 B6N58_RS02390 WP_045100155.1 514376..515440(+) (pilA) [Legionella micdadei strain NZ2015]
ATGATTAAATGGTTTAAAAGAAATCAAGGTGAAACTAAGCCTGAAGAACCTCTTGTTGAGGTTTCACCCGTACTTACTGA
AGAGCAGCATTATGAGGATAAATTAGCTCATTCGCCTGCCCCTAGTGATGAATCGCCAAAGCAAGGATTCTTTGCACGTA
TCAAGCGCGGATTGACTAAAACCCGCCAACAATTTGGTGAGGGGATTGGCCGATTATTACTTGGAAAAAAAGAGATCGAT
GCCTCTCTCTTGGAAGAGCTTGAACTCGTGTTGCTTGGTGCTGACCTAGGTGTTGAAACATCACAGTCTATCTTAAAGCA
ACTGGGCGAGGGTTTAGCAAGAAAGCAATTGACTGACGGGAATGCCGTCTTCCAAGAGTTAAAAAGGCGCCTGGAAGCTA
TCTTGTTAACTAGCGAAAAACCATTACAGTTAGAGAATCCTGATAAATCACCGTTTGTTATTTTAACCGTGGGCGTTAAT
GGAGCGGGTAAAACAACCTCTATTGGCAAAATGGCCAAACAATTCCAGCAGCAAGGTAAGAAAGTAATGCTCGCTGCAGG
AGATACTTTTCGTGCAGCAGCAGTTGAGCAGCTGCAAGTGTGGGGTGAGCGCAATCAGATACCTGTCATAGCACAACACA
CAGGAGCGGATAGTGCATCCGTGATTTACGATGCGCTGCAAGCGGCAAAAGCTAGAAATATTGATATTTTAATCGCGGAT
ACCGCTGGGCGCTTACACACTCAGGGAAATTTGATGGAAGAATTGAAAAAAGTGAAGCGGGTGTTACAAAAATTAGATGC
CAATGCCCCTCATGAAACCATGCTGATTTTAGACGCAAGTATTGGGCAAAATGCACTTAACCAGGCACGTCAATTTCATC
AATCCATTGGGGTAACAGGCATTACGATGACAAAGCTTGATGGAACTGCGAAAGGTGGGATTTTATTTGCTATCGCGAAT
GAATTAGGGATACCATTTCGTTACTTAGGTGTTGGTGAAGGAATTGACGATTTGCGTCCCTTTGATGCCCAGCAATTTGT
CAGAGCAATTTTTAATGATGATTAA
ATGATTAAATGGTTTAAAAGAAATCAAGGTGAAACTAAGCCTGAAGAACCTCTTGTTGAGGTTTCACCCGTACTTACTGA
AGAGCAGCATTATGAGGATAAATTAGCTCATTCGCCTGCCCCTAGTGATGAATCGCCAAAGCAAGGATTCTTTGCACGTA
TCAAGCGCGGATTGACTAAAACCCGCCAACAATTTGGTGAGGGGATTGGCCGATTATTACTTGGAAAAAAAGAGATCGAT
GCCTCTCTCTTGGAAGAGCTTGAACTCGTGTTGCTTGGTGCTGACCTAGGTGTTGAAACATCACAGTCTATCTTAAAGCA
ACTGGGCGAGGGTTTAGCAAGAAAGCAATTGACTGACGGGAATGCCGTCTTCCAAGAGTTAAAAAGGCGCCTGGAAGCTA
TCTTGTTAACTAGCGAAAAACCATTACAGTTAGAGAATCCTGATAAATCACCGTTTGTTATTTTAACCGTGGGCGTTAAT
GGAGCGGGTAAAACAACCTCTATTGGCAAAATGGCCAAACAATTCCAGCAGCAAGGTAAGAAAGTAATGCTCGCTGCAGG
AGATACTTTTCGTGCAGCAGCAGTTGAGCAGCTGCAAGTGTGGGGTGAGCGCAATCAGATACCTGTCATAGCACAACACA
CAGGAGCGGATAGTGCATCCGTGATTTACGATGCGCTGCAAGCGGCAAAAGCTAGAAATATTGATATTTTAATCGCGGAT
ACCGCTGGGCGCTTACACACTCAGGGAAATTTGATGGAAGAATTGAAAAAAGTGAAGCGGGTGTTACAAAAATTAGATGC
CAATGCCCCTCATGAAACCATGCTGATTTTAGACGCAAGTATTGGGCAAAATGCACTTAACCAGGCACGTCAATTTCATC
AATCCATTGGGGTAACAGGCATTACGATGACAAAGCTTGATGGAACTGCGAAAGGTGGGATTTTATTTGCTATCGCGAAT
GAATTAGGGATACCATTTCGTTACTTAGGTGTTGGTGAAGGAATTGACGATTTGCGTCCCTTTGATGCCCAGCAATTTGT
CAGAGCAATTTTTAATGATGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
55.949 |
87.853 |
0.492 |