Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | B6N58_RS00680 | Genome accession | NZ_CP020614 |
| Coordinates | 138142..138801 (+) | Length | 219 a.a. |
| NCBI ID | WP_045098087.1 | Uniprot ID | A0A098GAR0 |
| Organism | Legionella micdadei strain NZ2015 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 133142..143801
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6N58_RS00660 (B6N58_00660) | - | 133512..133694 (-) | 183 | WP_045098083.1 | hypothetical protein | - |
| B6N58_RS00665 (B6N58_00665) | - | 133851..136691 (+) | 2841 | WP_045098084.1 | hypothetical protein | - |
| B6N58_RS00670 (B6N58_00670) | dapB | 136767..137504 (-) | 738 | WP_045098085.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| B6N58_RS15205 | - | 137673..137828 (-) | 156 | Protein_131 | YqaE/Pmp3 family membrane protein | - |
| B6N58_RS00680 (B6N58_00680) | rocC | 138142..138801 (+) | 660 | WP_045098087.1 | ProQ/FinO family protein | Regulator |
| B6N58_RS00685 (B6N58_00685) | - | 138868..139275 (-) | 408 | WP_045098088.1 | acyl-CoA thioesterase | - |
| B6N58_RS00690 (B6N58_00690) | - | 139272..141449 (-) | 2178 | WP_102010572.1 | primosomal protein N' | - |
| B6N58_RS00695 (B6N58_00695) | - | 141446..141940 (-) | 495 | WP_045100474.1 | 6-carboxytetrahydropterin synthase | - |
| B6N58_RS00700 (B6N58_00700) | - | 141940..143052 (-) | 1113 | WP_045100475.1 | SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 219 a.a. Molecular weight: 24897.80 Da Isoelectric Point: 11.0145
>NTDB_id=224951 B6N58_RS00680 WP_045098087.1 138142..138801(+) (rocC) [Legionella micdadei strain NZ2015]
MRRQELHPRTAVINKTQKNKSKKARNEALSWLAVTFPQVFDNSLRIRPLKTGIMHDILAYADKAQEAGISKSKLREAVVL
FTRRIDYLTCLKAREMRIDLDGNPVAMVTEEEAERAAVKIKKRVEKSARNARKNLLSKVPNQSSRLSQPGFQPSQEIIPP
FPERAPAYSMQNASVQTTRSPSVIVKHKSARQFDPNAVARLKEKLGLSRKTEIEKENIE
MRRQELHPRTAVINKTQKNKSKKARNEALSWLAVTFPQVFDNSLRIRPLKTGIMHDILAYADKAQEAGISKSKLREAVVL
FTRRIDYLTCLKAREMRIDLDGNPVAMVTEEEAERAAVKIKKRVEKSARNARKNLLSKVPNQSSRLSQPGFQPSQEIIPP
FPERAPAYSMQNASVQTTRSPSVIVKHKSARQFDPNAVARLKEKLGLSRKTEIEKENIE
Nucleotide
Download Length: 660 bp
>NTDB_id=224951 B6N58_RS00680 WP_045098087.1 138142..138801(+) (rocC) [Legionella micdadei strain NZ2015]
ATGAGAAGACAAGAGCTTCATCCGCGGACAGCTGTAATTAATAAAACACAAAAAAATAAATCAAAGAAAGCTCGTAATGA
AGCTTTATCATGGCTAGCAGTTACTTTTCCGCAAGTATTTGATAATAGTTTACGAATTCGACCGCTCAAAACAGGAATTA
TGCATGATATCTTAGCTTACGCAGATAAAGCACAAGAAGCAGGGATATCGAAGAGCAAGCTTCGTGAGGCAGTAGTTCTA
TTTACCCGTCGCATTGATTATTTAACCTGCCTTAAAGCGCGTGAAATGCGAATTGATTTAGATGGTAATCCTGTTGCCAT
GGTGACTGAAGAAGAAGCGGAGAGGGCGGCGGTTAAAATTAAAAAACGAGTTGAGAAAAGTGCACGTAATGCACGCAAAA
ATCTGCTCAGTAAGGTGCCAAACCAATCCAGTAGGTTAAGCCAACCGGGTTTTCAACCAAGCCAAGAAATTATCCCCCCT
TTTCCAGAGCGCGCTCCTGCTTACAGCATGCAAAATGCTTCTGTGCAAACGACGCGTTCCCCTTCCGTGATTGTAAAACA
TAAGAGTGCTCGGCAATTTGATCCTAATGCAGTTGCACGGCTGAAAGAGAAGTTAGGCTTATCTCGCAAGACAGAAATAG
AGAAAGAAAACATTGAGTAG
ATGAGAAGACAAGAGCTTCATCCGCGGACAGCTGTAATTAATAAAACACAAAAAAATAAATCAAAGAAAGCTCGTAATGA
AGCTTTATCATGGCTAGCAGTTACTTTTCCGCAAGTATTTGATAATAGTTTACGAATTCGACCGCTCAAAACAGGAATTA
TGCATGATATCTTAGCTTACGCAGATAAAGCACAAGAAGCAGGGATATCGAAGAGCAAGCTTCGTGAGGCAGTAGTTCTA
TTTACCCGTCGCATTGATTATTTAACCTGCCTTAAAGCGCGTGAAATGCGAATTGATTTAGATGGTAATCCTGTTGCCAT
GGTGACTGAAGAAGAAGCGGAGAGGGCGGCGGTTAAAATTAAAAAACGAGTTGAGAAAAGTGCACGTAATGCACGCAAAA
ATCTGCTCAGTAAGGTGCCAAACCAATCCAGTAGGTTAAGCCAACCGGGTTTTCAACCAAGCCAAGAAATTATCCCCCCT
TTTCCAGAGCGCGCTCCTGCTTACAGCATGCAAAATGCTTCTGTGCAAACGACGCGTTCCCCTTCCGTGATTGTAAAACA
TAAGAGTGCTCGGCAATTTGATCCTAATGCAGTTGCACGGCTGAAAGAGAAGTTAGGCTTATCTCGCAAGACAGAAATAG
AGAAAGAAAACATTGAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
62.609 |
100 |
0.658 |