Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | E613_RS28275 | Genome accession | NZ_CP020603 |
| Coordinates | 5756577..5757134 (+) | Length | 185 a.a. |
| NCBI ID | WP_003094697.1 | Uniprot ID | A0A6N0KGD7 |
| Organism | Pseudomonas aeruginosa strain E6130952 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5751577..5762134
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E613_RS28255 (E613_55040) | pilR | 5752853..5754190 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| E613_RS28260 (E613_55050) | thiO | 5754236..5755330 (-) | 1095 | WP_003094695.1 | glycine oxidase ThiO | - |
| E613_RS28265 (E613_55060) | - | 5755465..5755974 (+) | 510 | WP_015503652.1 | GspH/FimT family pseudopilin | - |
| E613_RS28270 (E613_55070) | - | 5756080..5756586 (+) | 507 | WP_003094696.1 | GspH/FimT family pseudopilin | - |
| E613_RS28275 (E613_55080) | pilV | 5756577..5757134 (+) | 558 | WP_003094697.1 | type 4a pilus minor pilin PilV | Machinery gene |
| E613_RS28280 (E613_55090) | pilW | 5757131..5757955 (+) | 825 | WP_003094698.1 | type 4a pilus minor pilin PilW | - |
| E613_RS28285 (E613_55100) | pilX | 5757952..5758539 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| E613_RS28290 (E613_55110) | pilY1 | 5758551..5762042 (+) | 3492 | WP_003094704.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20069.21 Da Isoelectric Point: 8.2164
>NTDB_id=224888 E613_RS28275 WP_003094697.1 5756577..5757134(+) (pilV) [Pseudomonas aeruginosa strain E6130952]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=224888 E613_RS28275 WP_003094697.1 5756577..5757134(+) (pilV) [Pseudomonas aeruginosa strain E6130952]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |