Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | B7L35_RS03440 | Genome accession | NZ_CP020598 |
| Coordinates | 700715..701095 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836909.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain WKA02 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 695715..706095
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L35_RS03410 (B7L35_03410) | tadA | 695834..696337 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| B7L35_RS03415 (B7L35_03415) | - | 696344..697468 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| B7L35_RS03420 (B7L35_03420) | ung | 697465..698178 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| B7L35_RS03425 (B7L35_03425) | - | 698229..698825 (-) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| B7L35_RS03430 (B7L35_03430) | gspK | 699055..700014 (-) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| B7L35_RS03435 (B7L35_03435) | xcpW | 700014..700715 (-) | 702 | WP_000594588.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| B7L35_RS03440 (B7L35_03440) | xcpV | 700715..701095 (-) | 381 | WP_000836909.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| B7L35_RS03445 (B7L35_03445) | - | 701085..701639 (-) | 555 | WP_000841372.1 | type II secretion system protein | - |
| B7L35_RS03450 (B7L35_03450) | - | 701649..702257 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| B7L35_RS03455 (B7L35_03455) | - | 702295..703068 (-) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| B7L35_RS03460 (B7L35_03460) | - | 703086..703427 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| B7L35_RS03465 (B7L35_03465) | - | 703439..704419 (-) | 981 | WP_001075419.1 | DNA polymerase III subunit delta' | - |
| B7L35_RS03470 (B7L35_03470) | kdsB | 704431..705192 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13991.24 Da Isoelectric Point: 9.8004
>NTDB_id=224820 B7L35_RS03440 WP_000836909.1 700715..701095(-) (xcpV) [Acinetobacter baumannii strain WKA02]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=224820 B7L35_RS03440 WP_000836909.1 700715..701095(-) (xcpV) [Acinetobacter baumannii strain WKA02]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |