Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   B7L46_RS06500 Genome accession   NZ_CP020597
Coordinates   1162499..1163383 (-) Length   294 a.a.
NCBI ID   WP_083042158.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain HWBA8     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1157499..1168383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L46_RS06485 (B7L46_06490) miaB 1159347..1160798 (+) 1452 WP_000218140.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  B7L46_RS06490 (B7L46_06495) - 1160836..1161924 (+) 1089 WP_000122983.1 PhoH family protein -
  B7L46_RS06495 (B7L46_06500) ybeY 1161934..1162410 (+) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  B7L46_RS06500 (B7L46_06505) tonB2 1162499..1163383 (-) 885 WP_083042158.1 energy transducer TonB Machinery gene
  B7L46_RS06505 (B7L46_06510) - 1163614..1164285 (+) 672 WP_001193958.1 hypothetical protein -
  B7L46_RS06510 (B7L46_06515) - 1164443..1165156 (+) 714 WP_000201543.1 DUF3108 domain-containing protein -
  B7L46_RS06515 (B7L46_06520) - 1165229..1165804 (+) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  B7L46_RS06520 (B7L46_06525) wrbA 1165857..1166450 (-) 594 WP_001183355.1 NAD(P)H:quinone oxidoreductase -
  B7L46_RS06525 (B7L46_06530) - 1166738..1167985 (+) 1248 WP_000893464.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33652.51 Da        Isoelectric Point: 9.0935

>NTDB_id=224775 B7L46_RS06500 WP_083042158.1 1162499..1163383(-) (tonB2) [Acinetobacter baumannii strain HWBA8]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDETAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=224775 B7L46_RS06500 WP_083042158.1 1162499..1163383(-) (tonB2) [Acinetobacter baumannii strain HWBA8]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCCCAAGCTGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCAGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAACAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCGGAACTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

99.66

100

0.997

Multiple sequence alignment