Detailed information NTG0224748

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: B7L41_RS10365
• Genome accession: NZ_CP020595
• Coordinates: 2038161..2038862 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain USA15
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2033161..2043862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7L41_RS10330 (B7L41_10330)	kdsB	2033684..2034445 (+)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
B7L41_RS10335 (B7L41_10335)	-	2034457..2035437 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
B7L41_RS10340 (B7L41_10340)	-	2035449..2035790 (+)	342	WP_001183027.1	PilZ domain-containing protein	-
B7L41_RS10345 (B7L41_10345)	-	2035808..2036581 (+)	774	WP_000497300.1	TatD family hydrolase	-
B7L41_RS10350 (B7L41_10350)	-	2036619..2037227 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
B7L41_RS10355 (B7L41_10355)	-	2037237..2037791 (+)	555	WP_000841373.1	type II secretion system protein	-
B7L41_RS10360 (B7L41_10360)	xcpV	2037781..2038161 (+)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
B7L41_RS10365 (B7L41_10365)	xcpW	2038161..2038862 (+)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
B7L41_RS10370 (B7L41_10370)	gspK	2038862..2039821 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
B7L41_RS10375 (B7L41_10375)	-	2040051..2040647 (+)	597	WP_000908449.1	6-pyruvoyl trahydropterin synthase family protein	-
B7L41_RS10380 (B7L41_10380)	ung	2040698..2041411 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
B7L41_RS10385 (B7L41_10385)	-	2041408..2042532 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
B7L41_RS10390 (B7L41_10390)	tadA	2042539..2043042 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
B7L41_RS10395 (B7L41_10395)	-	2043112..2043555 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=224748 B7L41_RS10365 WP_000594579.1 2038161..2038862(+) (xcpW) [Acinetobacter baumannii strain USA15]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=224748 B7L41_RS10365 WP_000594579.1 2038161..2038862(+) (xcpW) [Acinetobacter baumannii strain USA15]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983