Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | B7L42_RS09865 | Genome accession | NZ_CP020590 |
| Coordinates | 1947069..1947449 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 15A34 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1942069..1952449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L42_RS09835 (B7L42_09835) | tadA | 1942187..1942690 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| B7L42_RS09840 (B7L42_09840) | - | 1942697..1943821 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| B7L42_RS09845 (B7L42_09845) | ung | 1943818..1944531 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| B7L42_RS09850 (B7L42_09850) | - | 1944582..1945178 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| B7L42_RS09855 (B7L42_09855) | gspK | 1945409..1946368 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| B7L42_RS09860 (B7L42_09860) | xcpW | 1946368..1947069 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| B7L42_RS09865 (B7L42_09865) | xcpV | 1947069..1947449 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| B7L42_RS09870 (B7L42_09870) | - | 1947439..1947993 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| B7L42_RS09875 (B7L42_09875) | - | 1948003..1948611 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| B7L42_RS09880 (B7L42_09880) | - | 1948649..1949422 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| B7L42_RS09885 (B7L42_09885) | - | 1949440..1949781 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| B7L42_RS09890 (B7L42_09890) | - | 1949793..1950773 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| B7L42_RS09895 (B7L42_09895) | kdsB | 1950785..1951546 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=224603 B7L42_RS09865 WP_000836911.1 1947069..1947449(-) (xcpV) [Acinetobacter baumannii strain 15A34]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=224603 B7L42_RS09865 WP_000836911.1 1947069..1947449(-) (xcpV) [Acinetobacter baumannii strain 15A34]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |