Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   B7L44_RS19480 Genome accession   NZ_CP020588
Coordinates   3995774..3997342 (+) Length   522 a.a.
NCBI ID   WP_004710946.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain SSA3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3990774..4002342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L44_RS19460 (B7L44_19460) - 3991265..3992566 (+) 1302 WP_002048970.1 homoserine dehydrogenase -
  B7L44_RS19465 (B7L44_19465) thrC 3992622..3993761 (+) 1140 WP_002048893.1 threonine synthase -
  B7L44_RS19470 (B7L44_19470) pbpG 3993870..3994916 (-) 1047 WP_004710943.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  B7L44_RS19475 (B7L44_19475) - 3995128..3995763 (+) 636 WP_000633799.1 response regulator transcription factor GacA -
  B7L44_RS19480 (B7L44_19480) pilS 3995774..3997342 (+) 1569 WP_004710946.1 sensor histidine kinase Regulator
  B7L44_RS19485 (B7L44_19485) pilR 3997367..3998788 (+) 1422 WP_083009365.1 sigma-54-dependent transcriptional regulator Regulator
  B7L44_RS19490 (B7L44_19490) - 3998792..3999976 (-) 1185 WP_006581175.1 S41 family peptidase -
  B7L44_RS19495 (B7L44_19495) gpmI 3999992..4001539 (-) 1548 WP_083009367.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59173.63 Da        Isoelectric Point: 6.8576

>NTDB_id=224575 B7L44_RS19480 WP_004710946.1 3995774..3997342(+) (pilS) [Acinetobacter nosocomialis strain SSA3]
MHSPLNSSLSHTIFRLGTWYGLYRLIIAVSLNIILVLTNAQTDNSLQQPSLYFYTLLSYSIVSLVQLLCFKFIAIQTTRQ
LILFFIVDIICLSLLSFSAGEPNLQISLLYVIAIFTSAILLSARVSLVITLLAVIAVIYQRFVGSLFDYNNLNTIGNSAL
LAFLFFVVHGIGQIAVQRFKLLEALTFHQSIELYQLQNINRYILEQIEQGYLVLDENYDIVVSNPAACSLLGIPPQFANE
KYPLAKWHADLFEILKFGDLKENDRFIFESRLSAYSINIKVQHLLVPQQALTLLILQDAQQINQQAQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELLKDSDLEQQNTLRHMIGKQTKRIDSIVQDTLGLARSERTHPIQIDLNNFINTLLDEDLSDVK
HSIQLKISDRSLKFLFDEKQLRQVMINLVRNALRHNAPDSPNVMINIHSQTNKIYIDVIDYGEGVSKRDISQLFKPFFST
EINGTGLGLYLSHSFCEANHAKLTYVEQKQGACFRIECPIIY

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=224575 B7L44_RS19480 WP_004710946.1 3995774..3997342(+) (pilS) [Acinetobacter nosocomialis strain SSA3]
ATGCACTCTCCTTTAAATTCATCCCTGTCCCATACGATTTTTCGTTTGGGCACTTGGTATGGTTTATACCGTCTTATTAT
TGCGGTTAGCCTGAATATTATTTTGGTTTTAACCAATGCTCAAACCGACAATAGTTTGCAGCAACCCTCTTTATATTTTT
ACACTTTACTAAGCTATTCAATTGTAAGTCTTGTGCAATTGTTATGCTTTAAATTTATTGCTATCCAAACTACTCGGCAG
CTTATTTTATTTTTTATTGTCGACATTATTTGTTTAAGCCTCCTTTCATTTTCTGCTGGGGAGCCTAATTTACAAATTAG
TTTGCTGTATGTGATTGCAATCTTTACTTCGGCGATTTTGCTCAGTGCAAGAGTGTCTTTAGTTATTACCTTACTTGCGG
TTATTGCGGTTATTTATCAACGCTTCGTGGGTAGTTTATTTGACTACAACAATCTAAACACAATCGGTAATAGCGCTTTA
TTAGCTTTTTTATTTTTCGTTGTTCACGGGATTGGACAAATTGCAGTGCAGCGCTTTAAATTACTTGAGGCACTCACCTT
TCACCAGTCAATCGAGCTTTACCAGCTTCAAAATATTAACCGTTATATTTTAGAGCAAATTGAACAAGGCTATTTAGTTT
TAGACGAAAATTACGACATTGTTGTTAGCAATCCCGCTGCTTGTTCATTGCTTGGTATTCCTCCACAGTTTGCCAATGAA
AAATATCCTTTAGCAAAGTGGCATGCCGATTTATTTGAAATATTGAAGTTTGGCGACTTAAAAGAAAATGACCGATTTAT
TTTTGAGTCTCGGCTATCGGCTTATTCCATTAATATTAAAGTGCAGCATCTTTTAGTGCCACAACAAGCTCTGACACTAC
TCATTTTACAAGATGCCCAACAAATTAATCAGCAAGCACAGCAACTCAAACTTGCCGCTTTAGGGCAACTCTCGGCAAGT
ATTGCACATGAAATCCGCAATCCTCTGGCTGCAATTGTTCAAGCAAATGAGTTACTTAAAGATAGTGATCTCGAACAACA
AAATACTTTACGCCATATGATTGGCAAGCAAACTAAACGCATTGATAGTATTGTTCAGGACACCTTAGGACTTGCTCGTA
GCGAAAGAACACACCCTATTCAGATTGACTTAAACAATTTTATAAATACGCTACTCGATGAAGATTTATCTGACGTTAAG
CACTCAATTCAACTCAAAATTTCTGATCGTTCTTTAAAATTTTTATTTGACGAAAAACAACTAAGACAAGTCATGATCAA
TTTAGTGCGAAATGCTTTACGACACAATGCACCCGACTCACCGAATGTCATGATCAACATTCATTCACAAACAAATAAAA
TTTATATTGATGTGATCGATTACGGTGAAGGTGTTTCAAAACGTGATATATCTCAATTATTTAAACCATTTTTTAGTACC
GAAATTAATGGAACTGGTTTAGGATTATACTTGTCTCATAGTTTTTGTGAGGCAAACCATGCAAAGCTCACCTATGTAGA
GCAAAAACAAGGGGCATGCTTCAGAATAGAATGCCCAATAATATATTGA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(313-375)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(417-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

94.253

100

0.943

Multiple sequence alignment