Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   B7L44_RS18810 Genome accession   NZ_CP020588
Coordinates   3848635..3850863 (+) Length   742 a.a.
NCBI ID   WP_083009310.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain SSA3     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3843635..3855863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L44_RS18785 (B7L44_18785) - 3845164..3845502 (-) 339 WP_000434938.1 tRNA-binding protein -
  B7L44_RS18790 (B7L44_18790) - 3845743..3846003 (+) 261 WP_004710772.1 DUF2798 domain-containing protein -
  B7L44_RS18795 (B7L44_18795) - 3846065..3846409 (-) 345 WP_083009307.1 hypothetical protein -
  B7L44_RS18800 (B7L44_18800) gspG 3846676..3847257 (-) 582 WP_031994182.1 type II secretion system major pseudopilin GspG -
  B7L44_RS18805 (B7L44_18805) gspF 3847281..3848486 (-) 1206 WP_001112089.1 type II secretion system inner membrane protein GspF -
  B7L44_RS18810 (B7L44_18810) priA 3848635..3850863 (+) 2229 WP_083009310.1 primosomal protein N' Machinery gene
  B7L44_RS18815 (B7L44_18815) - 3850939..3852780 (+) 1842 WP_004710778.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  B7L44_RS18820 (B7L44_18820) - 3852946..3853821 (+) 876 WP_004710781.1 Hsp33 family molecular chaperone HslO -
  B7L44_RS18825 (B7L44_18825) - 3853958..3854569 (+) 612 WP_002157001.1 LysE family translocator -
  B7L44_RS18830 (B7L44_18830) - 3854719..3855678 (+) 960 WP_083009311.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 83934.78 Da        Isoelectric Point: 8.5653

>NTDB_id=224570 B7L44_RS18810 WP_083009310.1 3848635..3850863(+) (priA) [Acinetobacter nosocomialis strain SSA3]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQNLIGIITEKVDPQESFTGNFQLKAISELL
DDEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKIIPCDNVEALLKRSIKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLIDCTLEPHDFSPAPVQLAQMPLTLNEDQKKATQHVLNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQGCPVLLGSATPSIDSYHLVETGKLTALQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWAQ
LVHAQRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=224570 B7L44_RS18810 WP_083009310.1 3848635..3850863(+) (priA) [Acinetobacter nosocomialis strain SSA3]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTTGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCAAAGCACAATATGAACGGGCTCAAGTAGGTTCACGCGTCGCAATTTCATTTGGACGGCAAAACCTGA
TTGGTATCATTACTGAAAAAGTTGACCCACAAGAATCATTTACAGGTAACTTTCAGCTTAAAGCCATTTCTGAACTTTTA
GATGATGAACCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCTGCCCAGTATTACCAATTTCCGATTGGTGA
AGTGATGCAAACGGCCCTACCCGCGTTATTGCGTCAGGGTAAACCCATGGATGTATTGTTTCATCTATGGAAAATCATTC
CTTGTGACAATGTTGAAGCCTTGTTAAAGCGTTCCATTAAGCAACAAGATGCGTATCAGATTTTAAAATTACATCCTGCC
GGAACTACAGAAAATATTCTTAATTTAAGTGGTGTAGAAACTGCGACACTTAAAGCACTTCAAAAGAAAGGACTGATAGA
CTGTACACTTGAGCCACATGACTTTAGCCCAGCACCTGTGCAATTGGCTCAAATGCCACTCACGCTTAATGAAGACCAAA
AGAAAGCAACTCAGCACGTCCTTAATGCACAGCATCAATACCAAGCATTTTTACTAGATGGCTTAACTGGAAGTGGTAAA
ACTGAAGTTTATTTGCACATCATGCATGAGGTGTTAAAACAAGGTAAGCAGGTATTGGTGTTAGTTCCTGAAATTGGTTT
AACCCCTCAAACCATTTCGCGCTTTAAGTCTCGTTTTAACTGCGACATTGCTTTATTACATTCGGGCTTAAATGACTCGA
AGCGCTTACAAGCATGGCAACAGGCACAGACTGGAAAGGCTTCTATTATTTTAGGAACACGTTCAGCCATTTATACCCCG
CTGCCACGTTTGGGCCTTATCATTTTAGATGAAGAGCACGATCTGTCTTATAAACAACAAGAAGGCTTTCGTTACCATGC
GCGTGATGTCGCGCTTTACCGCGGACATTTACAAGGCTGCCCTGTTCTTTTAGGTTCGGCAACCCCAAGCATTGATAGCT
ATCACTTAGTCGAAACTGGCAAGTTAACTGCACTTCAGCTGAACCAACGTGCAGGCCATGCGCTTTTACCAAAAATGCAT
TTGATTGATCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATCGAGCAAATTAAAAATACCCTAGCAAG
AAAAGAACAGGTTTTAATTTTTTTAAACCGACGTGGTTATGCACCTGTTCTGGTCTGTGAAAGTTGTGGTTGGCAAGCGA
ATTGTCCGCATTGTGATGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACATTGTCACCACTGCGGCACGGTT
CATCGCTTGCCAGACCACTGCCCTGAATGTCAGCAGAAGAGTTTAAAAACTTTAGGTGCTGGCACAGCCAAGGTTGAAGA
GCATTTACAAGAATTATTTCCAGATCATGATGTGATTCGGGTCGATCGTGACAGCACCAGCCGAGTCGGTAGCTGGCAAA
AAATTTATGATCGCATTCAGCAAAATAAACCTTCGATTTTGCTTGGTACGCAAATGTTGGCAAAAGGTCACCATTTTCCG
CATGTGACCTTGGTTGCTATTTTAGATATTGATGCAGGTTTATTGAGTGTCGATATACGAGCGCCAGAGCGTACTGCTCA
ATTGATTGTACAAGTGGCTGGTCGTGCAGGTCGTGGAGAACATAAAGGTCATGTTTATTTACAGACTTTAAGGCCAGATC
ACCCTTTATTGACCACGCTTATTGAAAAAGATTATCGGGCAGTCGCAAAGCAAACATTGGCTGAACGTAAAGTTGCATTA
CTGCCGCCTTATCGCTATGCCGTACTAATACGCGCTGAATCGAAAGATCGCGATTATACCTTGCATTTTTTAAATGAAGC
TGCCGAGCAACTTCGTCAAATTGCAGGTGATATTGTTGATATCTGGGGGCCAATTCCCGCGCCAATGGAACGTAAAGCGG
GACGTTACCGCGCCCATATGGTGATTTTGTCTGCTGACCGCGCTCGTCTGCATTTTTACTTAAGACAATGGTGGGCTCAG
TTGGTCCATGCGCAAAGACAGCATCAACTCAGACTCTCTATTGATGTTGACCCGCAAGAATTTAGTTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-369)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

98.113

100

0.981

Multiple sequence alignment