Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | B7L44_RS11675 | Genome accession | NZ_CP020588 |
| Coordinates | 2362140..2362520 (-) | Length | 126 a.a. |
| NCBI ID | WP_016804844.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain SSA3 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2357140..2367520
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L44_RS11645 (B7L44_11645) | tadA | 2357145..2357648 (-) | 504 | WP_031944625.1 | tRNA adenosine(34) deaminase TadA | - |
| B7L44_RS11650 (B7L44_11650) | - | 2357655..2358779 (-) | 1125 | WP_006580787.1 | enoyl-CoA hydratase/isomerase family protein | - |
| B7L44_RS11655 (B7L44_11655) | ung | 2358776..2359489 (-) | 714 | WP_002049829.1 | uracil-DNA glycosylase | - |
| B7L44_RS11660 (B7L44_11660) | - | 2359540..2360136 (-) | 597 | WP_016804842.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| B7L44_RS11665 (B7L44_11665) | gspK | 2360366..2361325 (-) | 960 | WP_004709110.1 | type II secretion system minor pseudopilin GspK | - |
| B7L44_RS11670 (B7L44_11670) | xcpW | 2361325..2362140 (-) | 816 | WP_016804843.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| B7L44_RS11675 (B7L44_11675) | xcpV | 2362140..2362520 (-) | 381 | WP_016804844.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| B7L44_RS11680 (B7L44_11680) | - | 2362510..2363061 (-) | 552 | WP_083008743.1 | type II secretion system protein | - |
| B7L44_RS11685 (B7L44_11685) | - | 2363071..2363679 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| B7L44_RS11690 (B7L44_11690) | - | 2363717..2364490 (-) | 774 | WP_004709116.1 | TatD family hydrolase | - |
| B7L44_RS11695 (B7L44_11695) | - | 2364508..2364849 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| B7L44_RS11700 (B7L44_11700) | - | 2364861..2365841 (-) | 981 | WP_083008744.1 | DNA polymerase III subunit delta' | - |
| B7L44_RS11705 (B7L44_11705) | kdsB | 2365853..2366614 (-) | 762 | WP_016804847.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13961.18 Da Isoelectric Point: 9.8004
>NTDB_id=224558 B7L44_RS11675 WP_016804844.1 2362140..2362520(-) (xcpV) [Acinetobacter nosocomialis strain SSA3]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAESTVSPNVQKINVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAESTVSPNVQKINVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=224558 B7L44_RS11675 WP_016804844.1 2362140..2362520(-) (xcpV) [Acinetobacter nosocomialis strain SSA3]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTGGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAAATTAATCAAGAGTGGTTGCAGGGCACTCAAAGTAAGCAAGTAACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTAATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTGGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAAATTAATCAAGAGTGGTTGCAGGGCACTCAAAGTAAGCAAGTAACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTAATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
96.032 |
100 |
0.96 |