Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   C2E46_RS07190 Genome accession   NZ_CP026082
Coordinates   1418355..1418795 (-) Length   146 a.a.
NCBI ID   WP_000431167.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain YZ1605     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1413355..1423795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2E46_RS07180 (C2E46_07430) - 1413806..1414012 (-) 207 WP_001872189.1 hypothetical protein -
  C2E46_RS07185 (C2E46_07435) - 1414662..1417601 (-) 2940 WP_161501898.1 MucBP domain-containing protein -
  C2E46_RS07190 (C2E46_07440) rcrR 1418355..1418795 (-) 441 WP_000431167.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  C2E46_RS07195 (C2E46_07445) - 1419064..1421136 (+) 2073 WP_000726917.1 bifunctional metallophosphatase/5'-nucleotidase -
  C2E46_RS07200 (C2E46_07450) - 1421173..1421583 (-) 411 WP_000594936.1 peptide deformylase -
  C2E46_RS07205 (C2E46_07455) gdhA 1421653..1423002 (-) 1350 WP_000200438.1 NADP-specific glutamate dehydrogenase -
  C2E46_RS07210 (C2E46_07460) - 1423170..1423679 (+) 510 WP_000870957.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16967.90 Da        Isoelectric Point: 10.0644

>NTDB_id=224517 C2E46_RS07190 WP_000431167.1 1418355..1418795(-) (rcrR) [Streptococcus agalactiae strain YZ1605]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKKKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMENFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=224517 C2E46_RS07190 WP_000431167.1 1418355..1418795(-) (rcrR) [Streptococcus agalactiae strain YZ1605]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTCGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATCTTACACATTTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGTTTTATTGCG
ATTGTACCATCTAAGACAGATAAGCGTGTAAAATACCTTTATTTGACTCACCTAGGTAAAAAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACTATGTTAGCAGGTATTACTAAAGAAGAGATTCGTACCACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCAATGGAAAATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411

Multiple sequence alignment