Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | B7L45_RS10990 | Genome accession | NZ_CP020579 |
| Coordinates | 2290188..2290568 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain SAA14 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2285188..2295568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L45_RS10960 (B7L45_10960) | tadA | 2285306..2285809 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| B7L45_RS10965 (B7L45_10965) | - | 2285816..2286940 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| B7L45_RS10970 (B7L45_10970) | ung | 2286937..2287650 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| B7L45_RS10975 (B7L45_10975) | - | 2287701..2288297 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| B7L45_RS10980 (B7L45_10980) | gspK | 2288528..2289487 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| B7L45_RS10985 (B7L45_10985) | xcpW | 2289487..2290188 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| B7L45_RS10990 (B7L45_10990) | xcpV | 2290188..2290568 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| B7L45_RS10995 (B7L45_10995) | - | 2290558..2291112 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| B7L45_RS11000 (B7L45_11000) | - | 2291122..2291730 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| B7L45_RS11005 (B7L45_11005) | - | 2291768..2292541 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| B7L45_RS11010 (B7L45_11010) | - | 2292559..2292900 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| B7L45_RS11015 (B7L45_11015) | - | 2292912..2293892 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| B7L45_RS11020 (B7L45_11020) | kdsB | 2293904..2294665 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=224371 B7L45_RS10990 WP_000836911.1 2290188..2290568(-) (xcpV) [Acinetobacter baumannii strain SAA14]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=224371 B7L45_RS10990 WP_000836911.1 2290188..2290568(-) (xcpV) [Acinetobacter baumannii strain SAA14]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |