Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RK88_RS01525 Genome accession   NZ_CP026071
Coordinates   254240..255058 (+) Length   272 a.a.
NCBI ID   WP_042904906.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FDAARGOS_30     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 249240..260058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RK88_RS01500 (RK88_001500) - 249858..250388 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  RK88_RS01505 (RK88_001505) yfkAB 250648..251799 (-) 1152 WP_001089600.1 radical SAM/CxCxxxxC motif protein YfkAB -
  RK88_RS01510 (RK88_001510) - 252023..252184 (+) 162 WP_001005407.1 SE1561 family protein -
  RK88_RS01515 (RK88_001515) - 252314..252829 (+) 516 WP_000163281.1 type 1 glutamine amidotransferase domain-containing protein -
  RK88_RS01520 (RK88_001520) sgtB 253170..253979 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  RK88_RS01525 (RK88_001525) recX 254240..255058 (+) 819 WP_042904906.1 recombination regulator RecX Regulator
  RK88_RS01530 (RK88_001530) - 255036..255350 (+) 315 WP_000435806.1 YfhH family protein -
  RK88_RS01535 (RK88_001535) - 255365..256882 (+) 1518 WP_042904905.1 ABC transporter ATP-binding protein -
  RK88_RS01540 (RK88_001540) - 256891..257727 (+) 837 WP_000886472.1 hypothetical protein -
  RK88_RS01550 (RK88_001550) - 257988..258965 (-) 978 WP_000379091.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32187.03 Da        Isoelectric Point: 6.3167

>NTDB_id=223755 RK88_RS01525 WP_042904906.1 254240..255058(+) (recX) [Staphylococcus aureus strain FDAARGOS_30]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEGSGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=223755 RK88_RS01525 WP_042904906.1 254240..255058(+) (recX) [Staphylococcus aureus strain FDAARGOS_30]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGGAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993