Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   CHELV3228_RS00775 Genome accession   NZ_CP020478
Coordinates   138946..140133 (+) Length   395 a.a.
NCBI ID   WP_082199095.1    Uniprot ID   A0AAX2UIC0
Organism   Campylobacter helveticus strain ATCC 51209     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 133946..145133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHELV3228_RS00735 - 134014..134583 (-) 570 WP_082199089.1 hypothetical protein -
  CHELV3228_RS00755 (CHELV3228_0147) - 135267..135767 (-) 501 WP_082199091.1 hypothetical protein -
  CHELV3228_RS00760 (CHELV3228_0148) ribD 135745..136728 (-) 984 WP_082199092.1 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD -
  CHELV3228_RS00765 (CHELV3228_0149) - 136729..137706 (-) 978 WP_082199093.1 galactosyltransferase-related protein -
  CHELV3228_RS00770 (CHELV3228_0150) - 137830..138924 (+) 1095 Protein_150 capsular polysaccharide biosynthesis protein -
  CHELV3228_RS00775 (CHELV3228_0151) kpsS 138946..140133 (+) 1188 WP_082199095.1 capsule biosynthesis protein Regulator
  CHELV3228_RS00780 (CHELV3228_0152) - 140202..141329 (+) 1128 WP_234981014.1 DUF829 domain-containing protein -
  CHELV3228_RS00785 (CHELV3228_0153) - 141331..142695 (+) 1365 WP_082199097.1 cytochrome P450 -
  CHELV3228_RS00790 (CHELV3228_0154) - 142692..143099 (+) 408 WP_082199098.1 hypothetical protein -
  CHELV3228_RS00795 (CHELV3228_0155) acpS 143100..143447 (-) 348 WP_082199099.1 holo-ACP synthase -
  CHELV3228_RS00800 (CHELV3228_0156) fliL 143447..143983 (-) 537 WP_082199100.1 flagellar basal body-associated protein FliL -

Sequence


Protein


Download         Length: 395 a.a.        Molecular weight: 46183.73 Da        Isoelectric Point: 9.8412

>NTDB_id=223609 CHELV3228_RS00775 WP_082199095.1 138946..140133(+) (kpsS) [Campylobacter helveticus strain ATCC 51209]
MQFDILLKKEFGGKNVVLLQGPVGNFFLRLATKLKKMNAKISKINFNGGDFFFYPKGHIYKGSRENLAAFYEDFFTKNQT
EAVLMYNDCRFINRTGLEVAKKLGIAVWIFEEGYLRPYCITLEKDGVNANSPMPRDKNFYLNLNLNDVGVEIKTIPGGFK
FMGFYSFLYWFFAFILAPFFNNSLHHRSLNPLEMFAWFKTLFLKYQYKISEKRLNAKIYKLEKKYFLAILQVYNDTQILN
HYKKDIEHFIEETILSFANHARAKSYLVFKHHPMDRGYRNYASLIEKLSEKYHVEGRILYVHDSYLPLLLKNALGCITIN
STVGLSAIIDGCPTKVCGEAFYDFEGLTYPKKLHFFWREAHAYKPNSLLVSQFKKYLLKTNQINGNFYKNSSLMG

Nucleotide


Download         Length: 1188 bp        

>NTDB_id=223609 CHELV3228_RS00775 WP_082199095.1 138946..140133(+) (kpsS) [Campylobacter helveticus strain ATCC 51209]
ATGCAATTTGATATTTTGTTGAAAAAAGAATTTGGCGGTAAAAATGTCGTGCTTTTGCAAGGTCCTGTGGGGAATTTCTT
TTTGCGTTTGGCTACCAAACTTAAAAAAATGAATGCAAAAATTTCAAAGATAAATTTTAATGGAGGGGATTTTTTCTTTT
ACCCTAAAGGGCATATTTATAAAGGCTCAAGGGAGAATTTGGCTGCGTTTTATGAGGATTTTTTTACCAAAAATCAAACT
GAGGCTGTTTTGATGTATAACGATTGTCGTTTTATCAATCGCACAGGTTTAGAAGTAGCAAAAAAGCTAGGCATTGCGGT
GTGGATTTTTGAAGAGGGGTATTTAAGACCTTATTGCATTACTTTAGAAAAAGATGGGGTTAATGCAAACTCGCCTATGC
CTCGTGATAAAAATTTTTATTTGAACTTGAATTTAAACGATGTGGGTGTAGAGATAAAAACTATACCGGGTGGATTTAAA
TTTATGGGTTTTTATAGCTTTTTATACTGGTTTTTTGCCTTTATTTTAGCGCCGTTTTTTAATAATTCTTTACATCATCG
TTCTTTAAATCCTTTGGAAATGTTTGCTTGGTTTAAGACTTTATTTTTAAAATATCAATATAAAATCAGCGAAAAAAGAC
TAAATGCTAAAATTTATAAGCTAGAAAAAAAGTATTTTTTAGCGATTTTGCAAGTGTATAACGACACGCAAATTTTAAAT
CATTATAAAAAAGATATAGAACATTTCATAGAAGAAACTATACTTTCCTTTGCAAATCACGCTAGGGCAAAATCTTATCT
TGTTTTTAAACATCACCCTATGGATAGGGGGTATAGAAATTACGCTTCTTTGATAGAGAAATTAAGCGAGAAATATCATG
TTGAGGGGCGAATTTTATATGTTCACGATAGCTATTTGCCGCTTTTGCTTAAAAATGCTTTAGGTTGCATTACGATTAAT
TCCACCGTGGGACTAAGTGCGATAATAGATGGTTGTCCAACCAAAGTATGTGGAGAGGCTTTTTATGATTTTGAGGGGCT
GACTTATCCTAAGAAACTCCATTTTTTCTGGCGTGAAGCCCACGCTTATAAGCCAAATTCTTTACTTGTTTCACAATTTA
AAAAATACCTTCTTAAAACAAATCAAATTAATGGAAATTTTTACAAAAACTCTTCTTTAATGGGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

72.564

98.734

0.716


Multiple sequence alignment