Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   RK79_RS05685 Genome accession   NZ_CP026067
Coordinates   1149454..1150128 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain FDAARGOS_21     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1144454..1155128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RK79_RS05660 (RK79_005660) - 1144676..1145743 (+) 1068 WP_000980142.1 membrane protein -
  RK79_RS05665 (RK79_005665) - 1145894..1146937 (+) 1044 WP_001030757.1 alpha/beta hydrolase -
  RK79_RS05670 (RK79_005670) - 1147266..1147694 (+) 429 WP_000198501.1 hypothetical protein -
  RK79_RS05675 (RK79_005675) - 1147896..1148402 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  RK79_RS05680 (RK79_005680) graX 1148515..1149438 (+) 924 WP_047213222.1 auxiliary protein GraX/ApsX -
  RK79_RS05685 (RK79_005685) braR 1149454..1150128 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  RK79_RS05690 (RK79_005690) graS 1150121..1151161 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  RK79_RS05695 (RK79_005695) vraF 1151305..1152066 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  RK79_RS05700 (RK79_005700) vraG 1152056..1153945 (+) 1890 WP_000143606.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=223411 RK79_RS05685 WP_001166496.1 1149454..1150128(+) (braR) [Staphylococcus aureus strain FDAARGOS_21]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=223411 RK79_RS05685 WP_001166496.1 1149454..1150128(+) (braR) [Staphylococcus aureus strain FDAARGOS_21]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397