Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RK78_RS13090 Genome accession   NZ_CP026066
Coordinates   2572418..2573236 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain FDAARGOS_20     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2567418..2578236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RK78_RS13065 (RK78_013065) - 2568511..2569488 (+) 978 WP_000379102.1 metal-dependent hydrolase -
  RK78_RS13075 (RK78_013075) - 2569749..2570585 (-) 837 WP_000886472.1 hypothetical protein -
  RK78_RS13080 (RK78_013080) - 2570594..2572111 (-) 1518 WP_000535849.1 ABC transporter ATP-binding protein -
  RK78_RS13085 (RK78_013085) - 2572126..2572440 (-) 315 WP_000435806.1 YfhH family protein -
  RK78_RS13090 (RK78_013090) recX 2572418..2573236 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  RK78_RS13095 (RK78_013095) sgtB 2573497..2574306 (-) 810 WP_000830377.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  RK78_RS13100 (RK78_013100) - 2574647..2575162 (-) 516 WP_000163281.1 type 1 glutamine amidotransferase domain-containing protein -
  RK78_RS13105 (RK78_013105) - 2575292..2575453 (-) 162 WP_001005407.1 SE1561 family protein -
  RK78_RS13110 (RK78_013110) yfkAB 2575677..2576828 (+) 1152 WP_001089600.1 radical SAM/CxCxxxxC motif protein YfkAB -
  RK78_RS13115 (RK78_013115) - 2577088..2577618 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=223385 RK78_RS13090 WP_001124422.1 2572418..2573236(-) (recX) [Staphylococcus aureus strain FDAARGOS_20]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=223385 RK78_RS13090 WP_001124422.1 2572418..2573236(-) (recX) [Staphylococcus aureus strain FDAARGOS_20]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996

Multiple sequence alignment