Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   A6J88_RS27895 Genome accession   NZ_CP020452
Coordinates   2750856..2751323 (+) Length   155 a.a.
NCBI ID   WP_039409432.1    Uniprot ID   -
Organism   Neisseria mucosa strain FDAARGOS_260     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2745856..2756323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J88_RS27860 (A6J88_13580) - 2746310..2746846 (+) 537 WP_060974875.1 gamma carbonic anhydrase family protein -
  A6J88_RS27865 (A6J88_13585) - 2746887..2747486 (+) 600 WP_049226317.1 Maf family protein -
  A6J88_RS27870 (A6J88_13590) - 2747512..2748126 (+) 615 WP_080614438.1 hypothetical protein -
  A6J88_RS27875 (A6J88_13595) - 2748208..2749473 (-) 1266 WP_045075769.1 Glu/Leu/Phe/Val family dehydrogenase -
  A6J88_RS27885 (A6J88_13605) - 2749869..2750579 (+) 711 WP_060974877.1 phosphoglycolate phosphatase -
  A6J88_RS27895 (A6J88_13615) recX 2750856..2751323 (+) 468 WP_039409432.1 recombination regulator RecX Regulator
  A6J88_RS27900 (A6J88_13620) - 2751400..2751894 (-) 495 WP_070440623.1 DUF302 domain-containing protein -
  A6J88_RS27905 (A6J88_13625) - 2751949..2752314 (-) 366 WP_070440626.1 rhodanese-like domain-containing protein -
  A6J88_RS27910 (A6J88_13630) - 2752441..2752776 (-) 336 WP_003756322.1 carboxymuconolactone decarboxylase family protein -
  A6J88_RS27915 (A6J88_13635) - 2752935..2753894 (+) 960 WP_003778933.1 helix-turn-helix domain-containing protein -
  A6J88_RS27920 (A6J88_13640) - 2754177..2755583 (-) 1407 WP_060974629.1 dihydrolipoyl dehydrogenase -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 17962.29 Da        Isoelectric Point: 7.2794

>NTDB_id=223323 A6J88_RS27895 WP_039409432.1 2750856..2751323(+) (recX) [Neisseria mucosa strain FDAARGOS_260]
MKPQKSLRARAMDILSRQEISRVGLKRKLAPYAESEEELENVLDEFAERNWQSDQRYAEAYIHSKSRQHGSLRLKQALAQ
QGIDETVSREFMPDKACELQTAVAVLRKKFKQPAADLKDKQKQARFLAYRGFDMDTIHAALKSSWDEEIFDASEE

Nucleotide


Download         Length: 468 bp        

>NTDB_id=223323 A6J88_RS27895 WP_039409432.1 2750856..2751323(+) (recX) [Neisseria mucosa strain FDAARGOS_260]
ATGAAACCCCAAAAATCCCTGCGCGCCCGCGCGATGGACATCCTTTCCCGACAGGAAATCAGCCGTGTCGGACTCAAGCG
CAAGCTCGCCCCGTATGCCGAAAGTGAAGAAGAATTGGAAAACGTGTTGGACGAATTTGCCGAACGCAACTGGCAATCCG
ACCAACGCTACGCCGAAGCCTACATCCACAGCAAAAGCCGCCAACACGGTTCCCTGCGTCTGAAACAGGCATTGGCGCAG
CAAGGCATAGACGAAACCGTCAGCCGTGAATTCATGCCTGACAAAGCGTGCGAACTGCAAACCGCAGTTGCCGTGTTGCG
CAAAAAATTCAAACAACCCGCCGCCGATTTGAAAGACAAACAAAAACAAGCGCGCTTCCTCGCCTATCGCGGATTCGACA
TGGACACCATCCACGCCGCGCTCAAAAGCAGTTGGGACGAAGAAATATTCGACGCTTCTGAAGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

79.605

98.065

0.781

Multiple sequence alignment