Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   A6J87_RS07300 Genome accession   NZ_CP020451
Coordinates   1413734..1414465 (+) Length   243 a.a.
NCBI ID   WP_080610806.1    Uniprot ID   A0A1V0GE99
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   export ComS (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IS/Tn 1411662..1412918 1413734..1414465 flank 816


Gene organization within MGE regions


Location: 1411662..1414465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS07285 (A6J87_07255) - 1411662..1412911 (+) 1250 Protein_1374 ISL3 family transposase -
  A6J87_RS07290 (A6J87_07260) - 1412954..1413253 (-) 300 WP_080610807.1 hypothetical protein -
  A6J87_RS07295 (A6J87_07265) - 1413250..1413669 (-) 420 WP_004183267.1 HIT family protein -
  A6J87_RS07300 (A6J87_07270) pptA 1413734..1414465 (+) 732 WP_080610806.1 ABC transporter ATP-binding protein Regulator

Sequence


Protein


Download         Length: 243 a.a.        Molecular weight: 26856.13 Da        Isoelectric Point: 4.4799

>NTDB_id=223266 A6J87_RS07300 WP_080610806.1 1413734..1414465(+) (pptA) [Streptococcus salivarius strain FDAARGOS_259]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKIFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=223266 A6J87_RS07300 WP_080610806.1 1413734..1414465(+) (pptA) [Streptococcus salivarius strain FDAARGOS_259]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAAATCTTTCGATTAGATGAAAAATTGGACTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTTATGATTATCTGTGCCTTTATTGTTAACCCCAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGTTTGGATCCCTTGGCAATCTCCGACCTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGTAAGGCGATTCTCAT
GTCTACCCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATCTTGCATCACGGTCAAGTCTTAGCACAGG
GGACTCTCGAGGAGCTCCGTCAGACTTTTGGCGACGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0GE99

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

99.177

100

0.992

  pptA Streptococcus thermophilus LMD-9

97.119

100

0.971


Multiple sequence alignment