Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   A6J87_RS07045 Genome accession   NZ_CP020451
Coordinates   1365189..1366265 (+) Length   358 a.a.
NCBI ID   WP_060971651.1    Uniprot ID   A0A1V0H8L6
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1360189..1371265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS07015 (A6J87_06985) - 1361080..1361826 (+) 747 WP_105257736.1 amino acid ABC transporter permease -
  A6J87_RS07020 (A6J87_06990) - 1361826..1362569 (+) 744 WP_080611823.1 amino acid ABC transporter ATP-binding protein -
  A6J87_RS07025 (A6J87_06995) - 1362781..1363005 (+) 225 WP_002884393.1 DUF4059 family protein -
  A6J87_RS07030 (A6J87_07000) trxB 1363038..1363991 (+) 954 WP_255296714.1 thioredoxin-disulfide reductase -
  A6J87_RS07035 (A6J87_07005) rsmD 1364085..1364681 (+) 597 WP_225791461.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  A6J87_RS07040 (A6J87_07010) coaD 1364714..1365211 (+) 498 WP_080611824.1 pantetheine-phosphate adenylyltransferase -
  A6J87_RS07045 (A6J87_07015) sepM 1365189..1366265 (+) 1077 WP_060971651.1 SepM family pheromone-processing serine protease Regulator
  A6J87_RS07050 (A6J87_07020) - 1366351..1367295 (+) 945 WP_060971650.1 TIGR01212 family radical SAM protein -
  A6J87_RS07055 (A6J87_07025) - 1367292..1367840 (+) 549 WP_060971649.1 class I SAM-dependent methyltransferase -
  A6J87_RS07060 (A6J87_07030) - 1367837..1368079 (+) 243 WP_060971648.1 hypothetical protein -
  A6J87_RS07065 (A6J87_07035) - 1368088..1370154 (+) 2067 WP_060971647.1 sodium:proton antiporter -
  A6J87_RS07070 (A6J87_07040) - 1370187..1370507 (-) 321 WP_080611826.1 hypothetical protein -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39066.74 Da        Isoelectric Point: 9.2472

>NTDB_id=223264 A6J87_RS07045 WP_060971651.1 1365189..1366265(+) (sepM) [Streptococcus salivarius strain FDAARGOS_259]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFSLFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVKVTYTTEDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=223264 A6J87_RS07045 WP_060971651.1 1365189..1366265(+) (sepM) [Streptococcus salivarius strain FDAARGOS_259]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTGCTAAGTATTTTTACGGT
ACTTTTCCTCCTCTTTTCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGG
AAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCTCAAACCAAGGCAACT
TTGGCCCTCATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCGACTGGAAATTACTCTGA
CGAAGATTTCATGCGTATCAACCAGTTTTACATGGAGACTTCACAAAACCAGGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGTTTCAAGGGTGTCCTTAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGACCTTTGATAATTCTACTGACTTGATTAAATACGTCCAAGGACTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATACGACAGAGGACAAAGAAAAGACTGCCACTGGTAAGATCATTAAGATTGCTA
ATGGTAAAAATGGTATCGGTATTGGTTTGACGGATCATACTGAGGTCAAGAGTCCTGAAAACGTGAAGTTTAAACTTGAT
GGTGTTGGTGGACCAAGTGCGGGGCTTATGTTTACTTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGTAAAATTGCTGGAACAGGTACTATTGAAAAGGATGGGGCTGTCGGTGATATCGGTGGGGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGCGCAGATATTTTCTTCGTGCCAAATAATCCAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGGACCAAGATGAAAATCGTTCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAGTAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H8L6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.103

95.251

0.62


Multiple sequence alignment