Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | A6J85_RS04135 | Genome accession | NZ_CP020450 |
| Coordinates | 823410..824768 (+) | Length | 452 a.a. |
| NCBI ID | WP_012131059.1 | Uniprot ID | P95761 |
| Organism | Streptococcus gordonii strain FDAARGOS_257 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 818410..829768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J85_RS04120 (A6J85_04080) | - | 819194..819916 (+) | 723 | WP_105165105.1 | ABC transporter ATP-binding protein | - |
| A6J85_RS04125 (A6J85_04085) | rpsD | 820182..820793 (+) | 612 | WP_008810013.1 | 30S ribosomal protein S4 | - |
| A6J85_RS04130 (A6J85_04090) | comA | 821247..823400 (+) | 2154 | WP_012131060.1 | peptide cleavage/export ABC transporter ComA | Regulator |
| A6J85_RS04135 (A6J85_04095) | comB | 823410..824768 (+) | 1359 | WP_012131059.1 | competence pheromone export protein ComB | Regulator |
| A6J85_RS04140 (A6J85_04100) | lytF | 824887..826536 (-) | 1650 | WP_012131057.1 | GBS Bsp-like repeat-containing protein | Regulator |
| A6J85_RS04145 (A6J85_04105) | purD | 826781..828040 (+) | 1260 | WP_012131055.1 | phosphoribosylamine--glycine ligase | - |
| A6J85_RS04150 (A6J85_04110) | - | 828100..829293 (+) | 1194 | WP_012131054.1 | ATP-grasp domain-containing protein | - |
Sequence
Protein
Download Length: 452 a.a. Molecular weight: 49879.14 Da Isoelectric Point: 6.0163
>NTDB_id=223165 A6J85_RS04135 WP_012131059.1 823410..824768(+) (comB) [Streptococcus gordonii strain FDAARGOS_257]
MNEQFLESAEFYQKRYHNFASCLIVPSLILLVFLVGFSMLAKKEITISSRASVEASRVLAQIQSTSNQPIIANHLAENKE
VKKGELLIQYAVEGEGAQEQKFSSQLDLLKDQKGKLETLRSSLESGRNQFTEPDSYGYEQSFKDYQNQVESMTSSVNQQN
ATIASQNAAASQSQAELGGVISDVDSKLNDHRNLKNAIQSGVGIDASHPLHSLYQSYRDQLSLAEDKATAQSQIVAQLDG
QISQLEATAATYRVQYAGAGAQQAYASNLSSQLASLKAQYLVKVGQELTTLTQQILEAESNLKLQETVSKRGQILAEMDG
LLHLNPEVQGSTLVAEGTALAQIYPKITNERKIKIVTYVSSKDVSTIKNGDKVRFITADDANKQMILTSQISSIDANATQ
TKQGNFFKVECEMAVSKDQAKKLRYGLEGKFVMVTGEKTYFSYYMEKFFNLG
MNEQFLESAEFYQKRYHNFASCLIVPSLILLVFLVGFSMLAKKEITISSRASVEASRVLAQIQSTSNQPIIANHLAENKE
VKKGELLIQYAVEGEGAQEQKFSSQLDLLKDQKGKLETLRSSLESGRNQFTEPDSYGYEQSFKDYQNQVESMTSSVNQQN
ATIASQNAAASQSQAELGGVISDVDSKLNDHRNLKNAIQSGVGIDASHPLHSLYQSYRDQLSLAEDKATAQSQIVAQLDG
QISQLEATAATYRVQYAGAGAQQAYASNLSSQLASLKAQYLVKVGQELTTLTQQILEAESNLKLQETVSKRGQILAEMDG
LLHLNPEVQGSTLVAEGTALAQIYPKITNERKIKIVTYVSSKDVSTIKNGDKVRFITADDANKQMILTSQISSIDANATQ
TKQGNFFKVECEMAVSKDQAKKLRYGLEGKFVMVTGEKTYFSYYMEKFFNLG
Nucleotide
Download Length: 1359 bp
>NTDB_id=223165 A6J85_RS04135 WP_012131059.1 823410..824768(+) (comB) [Streptococcus gordonii strain FDAARGOS_257]
ATGAATGAACAATTTTTAGAAAGTGCAGAGTTTTATCAGAAACGTTATCATAATTTTGCTAGTTGTTTAATTGTGCCAAG
TCTTATTTTACTAGTATTTCTAGTTGGTTTTTCCATGCTGGCTAAAAAAGAAATTACGATTTCTAGCCGTGCTTCTGTAG
AAGCTAGCCGAGTGCTAGCTCAGATTCAGTCGACTAGTAACCAGCCTATCATTGCGAATCATTTGGCAGAAAACAAGGAG
GTCAAAAAAGGGGAGTTGCTAATCCAGTATGCAGTAGAAGGAGAGGGAGCTCAGGAACAGAAGTTTTCCAGCCAGCTTGA
CTTACTCAAAGATCAAAAGGGCAAACTAGAAACTTTGCGTTCCAGTTTAGAAAGCGGGCGTAATCAATTTACTGAGCCAG
ATAGTTATGGCTACGAACAAAGCTTTAAAGACTACCAAAATCAAGTAGAGAGTATGACTAGTTCTGTGAATCAGCAAAAT
GCTACGATTGCTTCACAAAATGCAGCGGCCAGTCAGTCTCAGGCGGAACTGGGCGGTGTTATCAGTGATGTGGATAGCAA
ACTAAATGACCATCGAAACTTGAAAAATGCCATTCAAAGTGGGGTGGGTATAGATGCATCGCACCCTCTTCACTCCTTGT
ACCAGTCCTATCGTGATCAGTTGAGCCTGGCGGAGGATAAGGCAACAGCTCAAAGTCAGATTGTAGCTCAGTTAGATGGG
CAAATCTCTCAATTAGAAGCAACAGCTGCGACTTATCGTGTCCAATATGCTGGTGCAGGCGCTCAACAAGCCTATGCTAG
CAATTTATCCAGTCAGTTGGCTTCACTGAAAGCCCAGTATCTGGTCAAGGTAGGACAAGAATTGACCACTCTGACTCAGC
AAATCTTGGAAGCCGAGAGCAATCTTAAACTTCAAGAAACAGTCTCTAAGCGAGGTCAGATTTTGGCTGAAATGGATGGC
TTGCTTCACTTAAATCCAGAAGTACAAGGATCTACTCTGGTGGCAGAAGGAACTGCTTTGGCTCAGATTTACCCCAAAAT
CACTAATGAAAGAAAAATCAAAATTGTCACATATGTTTCTTCCAAGGATGTATCTACTATTAAAAATGGAGACAAGGTGC
GCTTTATCACAGCTGATGATGCTAACAAACAAATGATTTTGACATCCCAAATTTCCAGTATTGATGCTAATGCTACCCAA
ACCAAACAGGGAAATTTCTTTAAAGTAGAATGCGAAATGGCTGTTAGTAAAGATCAAGCTAAGAAGCTCCGCTATGGCTT
GGAAGGTAAATTTGTCATGGTAACTGGGGAAAAGACTTATTTCAGCTATTATATGGAAAAATTTTTCAATCTTGGTTGA
ATGAATGAACAATTTTTAGAAAGTGCAGAGTTTTATCAGAAACGTTATCATAATTTTGCTAGTTGTTTAATTGTGCCAAG
TCTTATTTTACTAGTATTTCTAGTTGGTTTTTCCATGCTGGCTAAAAAAGAAATTACGATTTCTAGCCGTGCTTCTGTAG
AAGCTAGCCGAGTGCTAGCTCAGATTCAGTCGACTAGTAACCAGCCTATCATTGCGAATCATTTGGCAGAAAACAAGGAG
GTCAAAAAAGGGGAGTTGCTAATCCAGTATGCAGTAGAAGGAGAGGGAGCTCAGGAACAGAAGTTTTCCAGCCAGCTTGA
CTTACTCAAAGATCAAAAGGGCAAACTAGAAACTTTGCGTTCCAGTTTAGAAAGCGGGCGTAATCAATTTACTGAGCCAG
ATAGTTATGGCTACGAACAAAGCTTTAAAGACTACCAAAATCAAGTAGAGAGTATGACTAGTTCTGTGAATCAGCAAAAT
GCTACGATTGCTTCACAAAATGCAGCGGCCAGTCAGTCTCAGGCGGAACTGGGCGGTGTTATCAGTGATGTGGATAGCAA
ACTAAATGACCATCGAAACTTGAAAAATGCCATTCAAAGTGGGGTGGGTATAGATGCATCGCACCCTCTTCACTCCTTGT
ACCAGTCCTATCGTGATCAGTTGAGCCTGGCGGAGGATAAGGCAACAGCTCAAAGTCAGATTGTAGCTCAGTTAGATGGG
CAAATCTCTCAATTAGAAGCAACAGCTGCGACTTATCGTGTCCAATATGCTGGTGCAGGCGCTCAACAAGCCTATGCTAG
CAATTTATCCAGTCAGTTGGCTTCACTGAAAGCCCAGTATCTGGTCAAGGTAGGACAAGAATTGACCACTCTGACTCAGC
AAATCTTGGAAGCCGAGAGCAATCTTAAACTTCAAGAAACAGTCTCTAAGCGAGGTCAGATTTTGGCTGAAATGGATGGC
TTGCTTCACTTAAATCCAGAAGTACAAGGATCTACTCTGGTGGCAGAAGGAACTGCTTTGGCTCAGATTTACCCCAAAAT
CACTAATGAAAGAAAAATCAAAATTGTCACATATGTTTCTTCCAAGGATGTATCTACTATTAAAAATGGAGACAAGGTGC
GCTTTATCACAGCTGATGATGCTAACAAACAAATGATTTTGACATCCCAAATTTCCAGTATTGATGCTAATGCTACCCAA
ACCAAACAGGGAAATTTCTTTAAAGTAGAATGCGAAATGGCTGTTAGTAAAGATCAAGCTAAGAAGCTCCGCTATGGCTT
GGAAGGTAAATTTGTCATGGTAACTGGGGAAAAGACTTATTTCAGCTATTATATGGAAAAATTTTTCAATCTTGGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus gordonii str. Challis substr. CH1 |
100 |
100 |
1 |
| comB | Streptococcus mitis NCTC 12261 |
55.778 |
99.558 |
0.555 |
| comB | Streptococcus pneumoniae D39 |
55.556 |
99.558 |
0.553 |
| comB | Streptococcus pneumoniae R6 |
55.556 |
99.558 |
0.553 |
| comB | Streptococcus pneumoniae Rx1 |
55.556 |
99.558 |
0.553 |
| comB | Streptococcus mitis SK321 |
55.111 |
99.558 |
0.549 |
| comB | Streptococcus pneumoniae TIGR4 |
55.111 |
99.558 |
0.549 |