Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   A6J85_RS01085 Genome accession   NZ_CP020450
Coordinates   207375..208106 (-) Length   243 a.a.
NCBI ID   WP_045505875.1    Uniprot ID   A0AAX1YIE4
Organism   Streptococcus gordonii strain FDAARGOS_257     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 202375..213106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J85_RS01055 (A6J85_01050) rnpM 202662..202958 (-) 297 WP_008808548.1 RNase P modulator RnpM -
  A6J85_RS01060 (A6J85_01055) nusA 202969..204210 (-) 1242 WP_045634222.1 transcription termination factor NusA -
  A6J85_RS01065 (A6J85_01060) rimP 204256..204744 (-) 489 WP_061594835.1 ribosome maturation factor RimP -
  A6J85_RS01070 (A6J85_01065) trmB 204853..205491 (-) 639 WP_061594834.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  A6J85_RS01075 (A6J85_01070) ccrZ 205488..206282 (-) 795 WP_008808544.1 cell cycle regulator CcrZ -
  A6J85_RS01080 (A6J85_01075) pptB 206323..207378 (-) 1056 WP_082307153.1 ABC transporter permease Regulator
  A6J85_RS01085 (A6J85_01080) pptA 207375..208106 (-) 732 WP_045505875.1 ABC transporter ATP-binding protein Regulator
  A6J85_RS01090 (A6J85_01085) - 208245..208661 (+) 417 WP_061594832.1 HIT family protein -
  A6J85_RS01095 (A6J85_01090) - 208672..208974 (+) 303 WP_061594831.1 hypothetical protein -
  A6J85_RS01100 (A6J85_01095) brpA 209022..210233 (-) 1212 WP_061594830.1 biofilm formation/cell division transcriptional regulator BrpA -
  A6J85_RS01105 (A6J85_01100) - 210240..210764 (-) 525 WP_045634228.1 GNAT family N-acetyltransferase -
  A6J85_RS01110 (A6J85_01105) tsaE 210764..211210 (-) 447 WP_045634229.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  A6J85_RS01115 (A6J85_01110) - 211293..212717 (-) 1425 WP_045634230.1 NCS2 family permease -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26845.28 Da        Isoelectric Point: 4.5658

>NTDB_id=223153 A6J85_RS01085 WP_045505875.1 207375..208106(-) (pptA) [Streptococcus gordonii strain FDAARGOS_257]
MLEIKGLTGGYVNIPVLKDVSFEVGDGQLVGLIGLNGAGKSTTINEIIGLLTPYQGEILIDGLSLKSDRTAYRKKIGFIP
ETPSLYEELTLKEHIETVAMAYDIDSQTAIDRVDKLLQIFRLKDKLDWFPVNFSKGMKQKVMIICAFVIDPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGNLAQLREEFSLPEASLNEIYLALTEE
AAL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=223153 A6J85_RS01085 WP_045505875.1 207375..208106(-) (pptA) [Streptococcus gordonii strain FDAARGOS_257]
ATGTTAGAAATAAAAGGGCTTACAGGTGGCTATGTCAATATTCCTGTTTTGAAAGATGTCAGTTTTGAAGTTGGAGACGG
TCAGCTTGTTGGACTGATTGGTCTAAACGGGGCTGGAAAGTCAACAACCATCAATGAAATAATCGGTCTCTTGACGCCTT
ATCAAGGGGAAATTTTGATAGATGGTTTGAGCCTGAAGTCAGACAGGACAGCCTATCGCAAAAAGATTGGTTTTATCCCT
GAAACACCGAGTCTCTATGAAGAATTAACCTTGAAGGAACATATTGAGACGGTTGCTATGGCTTATGATATTGACTCGCA
AACAGCAATAGATCGAGTGGATAAATTGCTTCAGATTTTTCGTCTTAAAGACAAGTTAGATTGGTTTCCGGTTAATTTCT
CAAAGGGAATGAAGCAGAAGGTTATGATCATCTGTGCCTTTGTGATTGACCCTAGTTTGTTTATTGTGGATGAACCCTTT
TTAGGATTGGATCCTCTGGCCATCTCTGATTTGATTGAGCTCTTGGCAGAAGAAAAGGCTAAAGGGAAGTCTATCCTGAT
GAGTACTCATGTGCTTGATTCGGCAGAGAAAATGTGTGATTCTTTTGTTATCTTGCACAAGGGTCAGGTACGGGCTAAAG
GAAATCTAGCACAGTTGCGAGAAGAATTTTCATTGCCAGAAGCAAGTCTTAATGAAATCTACCTAGCTTTGACAGAAGAG
GCTGCCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

98.354

0.733
  pptA Streptococcus thermophilus LMD-9

73.64

98.354

0.724

Multiple sequence alignment