Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A6J82_RS02120 Genome accession   NZ_CP020449
Coordinates   360157..360930 (-) Length   257 a.a.
NCBI ID   WP_000456084.1    Uniprot ID   A0AAD2WW20
Organism   Streptococcus agalactiae strain FDAARGOS_254     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 355157..365930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J82_RS02105 (A6J82_02135) - 355724..357162 (-) 1439 Protein_337 IS1182 family transposase -
  A6J82_RS02110 (A6J82_02140) dnaN 357296..358432 (-) 1137 WP_000581134.1 DNA polymerase III subunit beta -
  A6J82_RS02115 (A6J82_02145) dnaA 358587..359948 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  A6J82_RS02120 (A6J82_02150) spo0J 360157..360930 (-) 774 WP_000456084.1 ParB/RepB/Spo0J family partition protein Regulator
  A6J82_RS02125 (A6J82_02155) htrA 361028..362257 (-) 1230 WP_000728357.1 S1C family serine protease Regulator
  A6J82_RS02130 (A6J82_02160) rlmH 362458..362937 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29239.71 Da        Isoelectric Point: 9.8145

>NTDB_id=223105 A6J82_RS02120 WP_000456084.1 360157..360930(-) (spo0J) [Streptococcus agalactiae strain FDAARGOS_254]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=223105 A6J82_RS02120 WP_000456084.1 360157..360930(-) (spo0J) [Streptococcus agalactiae strain FDAARGOS_254]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTAGTAGCCGGAGAACGACGGTTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment