Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | A6J82_RS00840 | Genome accession | NZ_CP020449 |
| Coordinates | 141179..142153 (-) | Length | 324 a.a. |
| NCBI ID | WP_001008569.1 | Uniprot ID | A0AAD2WXW1 |
| Organism | Streptococcus agalactiae strain FDAARGOS_254 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 136179..147153
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J82_RS00805 (A6J82_00815) | - | 136303..136542 (+) | 240 | WP_000660182.1 | hypothetical protein | - |
| A6J82_RS00810 (A6J82_00820) | pepA | 136727..137794 (+) | 1068 | WP_001281321.1 | glutamyl aminopeptidase | - |
| A6J82_RS00815 (A6J82_00825) | proC | 137864..138634 (+) | 771 | WP_001881026.1 | pyrroline-5-carboxylate reductase | - |
| A6J82_RS00820 (A6J82_00830) | - | 138655..139320 (-) | 666 | WP_000008108.1 | CPBP family intramembrane glutamic endopeptidase | - |
| A6J82_RS00825 (A6J82_00835) | - | 139389..139655 (-) | 267 | Protein_137 | hypothetical protein | - |
| A6J82_RS00830 (A6J82_00840) | - | 139634..139826 (-) | 193 | Protein_138 | helix-turn-helix transcriptional regulator | - |
| A6J82_RS00835 (A6J82_00845) | - | 139954..141147 (-) | 1194 | WP_000047534.1 | acetate kinase | - |
| A6J82_RS00840 (A6J82_00850) | comYH | 141179..142153 (-) | 975 | WP_001008569.1 | class I SAM-dependent methyltransferase | Machinery gene |
| A6J82_RS00845 (A6J82_00855) | comGG | 142268..142639 (-) | 372 | WP_000601101.1 | competence type IV pilus minor pilin ComGG | - |
| A6J82_RS00850 (A6J82_00860) | comGF | 142617..143072 (-) | 456 | WP_000793378.1 | competence type IV pilus minor pilin ComGF | - |
| A6J82_RS00855 (A6J82_00865) | comYB | 143069..144112 (-) | 1044 | WP_223297804.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A6J82_RS00860 (A6J82_00870) | comYA | 144006..144977 (-) | 972 | WP_000250798.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A6J82_RS00865 (A6J82_00880) | - | 145142..146554 (+) | 1413 | WP_017771557.1 | IS1182 family transposase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37131.08 Da Isoelectric Point: 4.4041
>NTDB_id=223094 A6J82_RS00840 WP_001008569.1 141179..142153(-) (comYH) [Streptococcus agalactiae strain FDAARGOS_254]
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGCS
VQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGCS
VQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
Nucleotide
Download Length: 975 bp
>NTDB_id=223094 A6J82_RS00840 WP_001008569.1 141179..142153(-) (comYH) [Streptococcus agalactiae strain FDAARGOS_254]
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTTGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTGTAGT
GTCCAATTTATCCAAGAGGATGCTGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTTGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTGTAGT
GTCCAATTTATCCAAGAGGATGCTGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
67.302 |
97.222 |
0.654 |
| comYH | Streptococcus mutans UA140 |
67.302 |
97.222 |
0.654 |