Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   A6J74_RS23635 Genome accession   NZ_CP020437
Coordinates   4135105..4135899 (+) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus sp. FDAARGOS_235     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 4130105..4140899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J74_RS23615 (A6J74_23660) argR 4130949..4131398 (+) 450 WP_001032581.1 arginine repressor ArgR -
  A6J74_RS23620 (A6J74_23665) recN 4131660..4133399 (+) 1740 WP_000947738.1 DNA repair protein RecN Machinery gene
  A6J74_RS23625 (A6J74_23670) spoIVB 4133518..4134816 (+) 1299 WP_002048975.1 SpoIVB peptidase -
  A6J74_RS23635 (A6J74_23680) spo0A 4135105..4135899 (+) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  A6J74_RS30745 - 4136146..4136371 (+) 226 Protein_4130 hypothetical protein -
  A6J74_RS23640 (A6J74_23685) - 4136774..4138192 (+) 1419 WP_001193753.1 membrane protein -
  A6J74_RS23645 (A6J74_23690) - 4138392..4139717 (+) 1326 WP_000395075.1 glycosyltransferase -
  A6J74_RS23650 (A6J74_23695) - 4139946..4140092 (-) 147 WP_001247671.1 YycC family protein -
  A6J74_RS23655 (A6J74_23700) - 4140143..4140871 (+) 729 WP_000172598.1 glycerophosphodiester phosphodiesterase -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=223077 A6J74_RS23635 WP_000411416.1 4135105..4135899(+) (spo0A) [Bacillus sp. FDAARGOS_235]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=223077 A6J74_RS23635 WP_000411416.1 4135105..4135899(+) (spo0A) [Bacillus sp. FDAARGOS_235]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACCTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGTGGCAAGGCAAATGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATAGATGGAAAACCGAAAAACTTAGATGCAAGTATTACGAGTATTATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGATACATGTACTTACGAGAAGCGATTTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCGAGCCGTGTCGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGAAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814


Multiple sequence alignment