Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | A6J74_RS23265 | Genome accession | NZ_CP020437 |
| Coordinates | 4081659..4082702 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013172.1 | Uniprot ID | - |
| Organism | Bacillus sp. FDAARGOS_235 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4076659..4087702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J74_RS23230 (A6J74_23275) | - | 4077043..4077531 (+) | 489 | WP_000764243.1 | hypothetical protein | - |
| A6J74_RS23235 (A6J74_23280) | - | 4077567..4077878 (-) | 312 | WP_001092832.1 | hypothetical protein | - |
| A6J74_RS23240 (A6J74_23285) | - | 4078131..4078346 (+) | 216 | WP_001008324.1 | DUF3912 family protein | - |
| A6J74_RS23245 (A6J74_23290) | - | 4078434..4078826 (+) | 393 | WP_000875407.1 | hypothetical protein | - |
| A6J74_RS23250 (A6J74_23295) | - | 4078889..4080283 (-) | 1395 | WP_001094350.1 | L-cystine transporter | - |
| A6J74_RS23255 (A6J74_23300) | - | 4080391..4080633 (-) | 243 | WP_000440717.1 | DUF2626 domain-containing protein | - |
| A6J74_RS23260 (A6J74_23305) | - | 4080759..4081454 (-) | 696 | WP_000434112.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| A6J74_RS23265 (A6J74_23310) | comGA | 4081659..4082702 (+) | 1044 | WP_001013172.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A6J74_RS23270 (A6J74_23315) | comGB | 4082689..4083726 (+) | 1038 | WP_002093281.1 | competence type IV pilus assembly protein ComGB | - |
| A6J74_RS23275 (A6J74_23320) | comGC | 4083738..4084037 (+) | 300 | WP_001178691.1 | competence type IV pilus major pilin ComGC | - |
| A6J74_RS23280 (A6J74_23325) | comGD | 4084034..4084489 (+) | 456 | WP_000810404.1 | competence type IV pilus minor pilin ComGD | - |
| A6J74_RS23285 (A6J74_23330) | - | 4084482..4084784 (+) | 303 | WP_000829525.1 | hypothetical protein | - |
| A6J74_RS23290 (A6J74_23335) | comGF | 4084754..4085227 (+) | 474 | WP_000477944.1 | competence type IV pilus minor pilin ComGF | - |
| A6J74_RS23295 (A6J74_23340) | comGG | 4085224..4085595 (+) | 372 | WP_000743702.1 | competence type IV pilus minor pilin ComGG | - |
| A6J74_RS23300 (A6J74_23345) | - | 4085770..4086420 (+) | 651 | WP_000183875.1 | 2OG-Fe(II) oxygenase | - |
| A6J74_RS23305 (A6J74_23350) | - | 4086541..4087038 (+) | 498 | WP_000836652.1 | shikimate kinase | - |
| A6J74_RS23310 (A6J74_23355) | - | 4087077..4087277 (+) | 201 | WP_000106086.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39204.57 Da Isoelectric Point: 8.5491
>NTDB_id=223075 A6J74_RS23265 WP_001013172.1 4081659..4082702(+) (comGA) [Bacillus sp. FDAARGOS_235]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLITKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYRESLVIRLHLQASVQPLSHLSLFPSTAEKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKRKTRRIVTLEDPVEKRKDDLLQIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQALLAVAAQRLVELKCPFCRGKCSILCKSMRQVRQASVYELLDGYDLQQAIKEANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLITKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYRESLVIRLHLQASVQPLSHLSLFPSTAEKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKRKTRRIVTLEDPVEKRKDDLLQIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQALLAVAAQRLVELKCPFCRGKCSILCKSMRQVRQASVYELLDGYDLQQAIKEANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=223075 A6J74_RS23265 WP_001013172.1 4081659..4082702(+) (comGA) [Bacillus sp. FDAARGOS_235]
ATGAATGGAATTGAAATTTTTGCGAATACAATTTTGAAAGAAGCGTGTAGGGTACAAGCATCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTTCAGCTACGTATAGGAAAAGATTTAATTACGAAACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCGCACTTTAAATTTTTGGCATCCATGGATATAGGAGAGAGGCGGAAGCCACAAAATGGTTCATTGTAT
TTACAAATTGATGGACAAGAAGTGTATTTACGTCTTTCAACACTTCCGACTGTATATCGAGAAAGTCTCGTGATTCGCCT
TCATTTACAAGCATCTGTGCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACGGCGGAAAAACTCCTCTCTTTTTTAC
GTTATTCACATGGTCTACTCGTATTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAGGAAAACACGTCGAATTGTAACACTTGAAGACCCAGTTGAAAAAAGAAAAGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACTTATGAGGCTGGACTAAAGGCTATTTTACGCCATGATCCAGATATTATATTAGTTG
GTGAAATCCGGGATGAAGAAACAGCAAAAATAGCTGTAAGAGCAAGTTTAACTGGACATTTAGTAATGACGACCCTGCAT
ACGAATGATGCGAAAGGAGCGATACTCAGATTTATGGATTATGGCATAACGAGGCAAGAAATTGAACAAGCTTTATTGGC
TGTCGCTGCACAGCGACTTGTTGAATTAAAGTGTCCATTTTGCAGAGGAAAGTGCTCAATTTTATGTAAATCAATGCGGC
AAGTAAGACAAGCAAGCGTTTACGAGTTGTTAGATGGATATGATTTGCAACAAGCAATTAAAGAAGCGAACGGAGAATGT
GTTACGTACAAACATGAAACATTAGAATCTTCGATACGAAAAGGGTATGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAATTTTTGCGAATACAATTTTGAAAGAAGCGTGTAGGGTACAAGCATCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTTCAGCTACGTATAGGAAAAGATTTAATTACGAAACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCGCACTTTAAATTTTTGGCATCCATGGATATAGGAGAGAGGCGGAAGCCACAAAATGGTTCATTGTAT
TTACAAATTGATGGACAAGAAGTGTATTTACGTCTTTCAACACTTCCGACTGTATATCGAGAAAGTCTCGTGATTCGCCT
TCATTTACAAGCATCTGTGCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACGGCGGAAAAACTCCTCTCTTTTTTAC
GTTATTCACATGGTCTACTCGTATTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAGGAAAACACGTCGAATTGTAACACTTGAAGACCCAGTTGAAAAAAGAAAAGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACTTATGAGGCTGGACTAAAGGCTATTTTACGCCATGATCCAGATATTATATTAGTTG
GTGAAATCCGGGATGAAGAAACAGCAAAAATAGCTGTAAGAGCAAGTTTAACTGGACATTTAGTAATGACGACCCTGCAT
ACGAATGATGCGAAAGGAGCGATACTCAGATTTATGGATTATGGCATAACGAGGCAAGAAATTGAACAAGCTTTATTGGC
TGTCGCTGCACAGCGACTTGTTGAATTAAAGTGTCCATTTTGCAGAGGAAAGTGCTCAATTTTATGTAAATCAATGCGGC
AAGTAAGACAAGCAAGCGTTTACGAGTTGTTAGATGGATATGATTTGCAACAAGCAATTAAAGAAGCGAACGGAGAATGT
GTTACGTACAAACATGAAACATTAGAATCTTCGATACGAAAAGGGTATGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.637 |
100 |
0.576 |