Detailed information NTG0223064

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: A6J74_RS18580
• Genome accession: NZ_CP020437
• Coordinates: 3249017..3250366 (+)
• Length: 449 a.a.
• NCBI ID: WP_000948469.1
• Uniprot ID: -
• Organism: Bacillus sp. FDAARGOS_235
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3244017..3255366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J74_RS18555 (A6J74_18590)	-	3245118..3245753 (-)	636	WP_000926676.1	YigZ family protein	-
A6J74_RS18560 (A6J74_18595)	-	3245992..3246834 (+)	843	WP_000844774.1	DegV family protein	-
A6J74_RS18570 (A6J74_18605)	-	3247006..3247320 (+)	315	WP_000400852.1	helix-turn-helix domain-containing protein	-
A6J74_RS18575 (A6J74_18610)	-	3247481..3248890 (+)	1410	WP_000499464.1	NlpC/P60 family protein	-
A6J74_RS18580 (A6J74_18615)	comFA	3249017..3250366 (+)	1350	WP_000948469.1	ATP-dependent helicase ComFA	Machinery gene
A6J74_RS18585 (A6J74_18620)	-	3250366..3251070 (+)	705	WP_000543526.1	ComF family protein	-
A6J74_RS18590 (A6J74_18625)	cspC	3251197..3251394 (+)	198	WP_002045823.1	cold shock protein CspC	-
A6J74_RS18595 (A6J74_18630)	hpf	3251713..3252255 (+)	543	WP_000671188.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
A6J74_RS18600 (A6J74_18635)	secA	3252530..3255037 (+)	2508	WP_000579396.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50850.61 Da
• Isoelectric Point: 9.5260

>NTDB_id=223064 A6J74_RS18580 WP_000948469.1 3249017..3250366(+) (comFA) [Bacillus sp. FDAARGOS_235]
MLSGKQLLLEELSTDVRDNLDDLKKKGEVVCVQGVKNKASTYMCQRCGNIAQRLFSSFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAEKEGEMDVNPLQWKGNLSTGQELAAQGVMEAVKQKESFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLKEVFPNINVAALYGGSLDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVKQAM
KEKAACIYLTATPDEEWKRNLRKGKQKGIVVSGRYHRHPLPVPKFCCCGNWKKSLINKRIPQVLLQWLKVYLNKKHPIFL
FVPHVRYIEKMSRLLKLLDDRVAGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGTEEEIFSESALV
QIAGRVGRSFEEPYGEVIYFHYGKTEAMVRAKKHIRSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=223064 A6J74_RS18580 WP_000948469.1 3249017..3250366(+) (comFA) [Bacillus sp. FDAARGOS_235]
ATGTTATCTGGGAAACAGTTATTATTAGAAGAACTCTCTACAGACGTACGGGATAATTTAGATGATTTGAAGAAGAAGGG
AGAGGTCGTATGTGTACAAGGTGTAAAAAATAAGGCTTCTACATATATGTGTCAGCGTTGCGGAAATATAGCACAAAGAC
TCTTTTCGTCATTTTTGTGTAAAAGGTGTAGTAAAGTCTGCACATATTGCCGGAAGTGCATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTGCCGAAAAAGAAGGAGAAATGGATGTAAATCCGTTACAGTGGAAAGGAAATTT
ATCTACTGGCCAGGAGTTGGCTGCGCAAGGTGTTATGGAGGCTGTTAAACAGAAAGAATCGTTTTTTATTTGGGCTGTGT
GCGGCGCTGGAAAAACAGAAATGTTGTTTTATGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTACTTGAATTAGCACCGAGATTGAAAGAAGTATTTCCGAATATAAATGTAGCTGCTTTATACGG
TGGAAGTTTAGATCGGGAAAAAGATGCAGCGTTAGTCGTTGCGACCACCCATCAGCTATTGCGTTATTATAGAGCGTTTC
ATGTCATGATTGTAGATGAAATAGATGCCTTTCCATACCATGCAGATCAAATGTTGCAGTATGCGGTAAAACAAGCGATG
AAAGAGAAGGCGGCATGTATTTATTTAACTGCAACTCCAGATGAAGAGTGGAAGCGTAACCTTAGAAAGGGGAAACAAAA
AGGTATCGTTGTTTCTGGACGGTATCACCGTCATCCGTTGCCAGTCCCCAAATTTTGCTGTTGCGGAAACTGGAAGAAAA
GCCTCATCAATAAAAGAATTCCTCAAGTTTTACTACAATGGTTAAAAGTATACTTAAATAAAAAGCACCCCATTTTTTTA
TTTGTTCCCCATGTGCGATATATAGAAAAAATGAGTCGGTTATTGAAGCTGTTAGACGATAGAGTTGCCGGTGTGCATGC
AGAAGATCCAATGAGAAAAGAAAAAGTTGCAGCTTTCAGAAAGGGAGAAATTCCTTTATTAGTTACAACGACGATTTTGG
AGAGAGGAGTAACGGTGAAAAATTTGCAAGTTGCGGTTTTAGGGACGGAAGAAGAAATATTTTCAGAAAGTGCACTCGTA
CAAATTGCAGGCCGGGTAGGTCGTAGTTTTGAAGAGCCGTATGGAGAGGTCATTTATTTTCATTATGGTAAGACAGAGGC
GATGGTGCGCGCGAAAAAACACATTCGAAGTATGAACAAAAATGCGAAAGAACAAGGGTTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (106-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.452	98.441	0.497
comFA	Latilactobacillus sakei subsp. sakei 23K	40.695	89.755	0.365