Detailed information NTG0223058

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: A6J74_RS17000
• Genome accession: NZ_CP020437
• Coordinates: 2923254..2924381 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470741.1
• Uniprot ID: A0A2B5ZTQ8
• Organism: Bacillus sp. FDAARGOS_235
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2918254..2929381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J74_RS16990 (A6J74_17015)	gyrA	2918732..2921203 (-)	2472	WP_001282862.1	DNA gyrase subunit A	-
A6J74_RS16995 (A6J74_17020)	gyrB	2921292..2923214 (-)	1923	WP_000435980.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
A6J74_RS17000 (A6J74_17025)	recF	2923254..2924381 (-)	1128	WP_000470741.1	DNA replication/repair protein RecF	Machinery gene
A6J74_RS17005 (A6J74_17030)	yaaA	2924394..2924606 (-)	213	WP_000821369.1	S4 domain-containing protein YaaA	-
A6J74_RS17010 (A6J74_17035)	dnaN	2924734..2925879 (-)	1146	WP_001212897.1	DNA polymerase III subunit beta	-
A6J74_RS17015 (A6J74_17040)	dnaA	2926058..2927398 (-)	1341	WP_000428014.1	chromosomal replication initiator protein DnaA	-
A6J74_RS17020 (A6J74_17045)	rpmH	2927963..2928097 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
A6J74_RS17025 (A6J74_17050)	rnpA	2928174..2928521 (+)	348	WP_000728890.1	ribonuclease P protein component	-
A6J74_RS17030 (A6J74_17055)	spoIIIJ	2928574..2929341 (+)	768	WP_000727742.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43320.59 Da
• Isoelectric Point: 6.5997

>NTDB_id=223058 A6J74_RS17000 WP_000470741.1 2923254..2924381(-) (recF) [Bacillus sp. FDAARGOS_235]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFDFLHLLQEWAAPIHRGISRGLEELEIIYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=223058 A6J74_RS17000 WP_000470741.1 2923254..2924381(-) (recF) [Bacillus sp. FDAARGOS_235]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTGAATGT
AATTATCGGCGAAAATGCGCAAGGGAAAACAAATTTGATGGAAGCTATTTATGTGTTAGCGATGGCGAAATCTCATAGAA
CCTCCAATGACCGCGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGGAAATTACAAAAGAGAAATAGTTCT
TTGTCTTTAGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTGAGTCAATA
TATTGGCGAAATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTTTATTTGTATGAATTAAGTCAATATCAAAAAGTGCTCACGCAACGA
AACCACTTGCTAAAAAAAATGCAAGGGAATAGTAAAAATGAGGAAACGATGTTGGATGTATTTACACTGCAACTGATTGA
ACACGGTGCAAAAATATTGCAAAAGCGTTTTGATTTTTTACATTTACTGCAAGAATGGGCAGCCCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTATTTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACTGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTGAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2B5ZTQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.576	98.133	0.653