Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | A6J74_RS16480 | Genome accession | NZ_CP020437 |
| Coordinates | 2829823..2832258 (-) | Length | 811 a.a. |
| NCBI ID | WP_000971171.1 | Uniprot ID | A0AAJ1P7X2 |
| Organism | Bacillus sp. FDAARGOS_235 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2824823..2837258
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J74_RS16460 (A6J74_16485) | ispD | 2825313..2825993 (-) | 681 | WP_000288308.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| A6J74_RS16465 (A6J74_16490) | - | 2826010..2827113 (-) | 1104 | WP_000919680.1 | PIN/TRAM domain-containing protein | - |
| A6J74_RS16470 (A6J74_16495) | disA | 2827274..2828347 (-) | 1074 | WP_000392164.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| A6J74_RS16475 (A6J74_16500) | radA | 2828351..2829727 (-) | 1377 | WP_001085199.1 | DNA repair protein RadA | Machinery gene |
| A6J74_RS16480 (A6J74_16505) | clpC | 2829823..2832258 (-) | 2436 | WP_000971171.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| A6J74_RS16485 (A6J74_16510) | - | 2832281..2833345 (-) | 1065 | WP_000050835.1 | protein arginine kinase | - |
| A6J74_RS16490 (A6J74_16515) | - | 2833350..2833898 (-) | 549 | WP_000128388.1 | UvrB/UvrC motif-containing protein | - |
| A6J74_RS16495 (A6J74_16520) | ctsR | 2834069..2834530 (-) | 462 | WP_001244560.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90557.44 Da Isoelectric Point: 6.3059
>NTDB_id=223055 A6J74_RS16480 WP_000971171.1 2829823..2832258(-) (clpC) [Bacillus sp. FDAARGOS_235]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSATNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKYLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELQLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSATNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKYLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELQLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=223055 A6J74_RS16480 WP_000971171.1 2829823..2832258(-) (clpC) [Bacillus sp. FDAARGOS_235]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGGCGTGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAGGTTATTGAATTATCTATGGATGAAGCGCGTAAGCTAGGCCATTCTTACGTTGGAACAGAACA
CATTTTACTCGGTTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGTGTAAGTTTAAATAAAG
CGAGACAACAAGTGTTACAACTTCTTGGAAGTAATGAAGCTAGTTCAGGTCATCAAGGTGGTTCAGCAACAAATGCAAAT
ACACCGACACTTGACAGTTTAGCAAGGGACTTAACAGTTGTTGCACGTGAAAATCGCTTAGACCCTGTTATTGGACGTGG
TAAAGAAATTCAACGTGTAATTGAGGTGTTAAGCCGTAGAACGAAAAACAACCCAGTATTAATCGGTGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGACATGGGTACAGTAGTAGCTGGAACGAAATATCGCGGTGAATTTGAAGACCGTTTAAAGAAAGTGATGGA
TGAAATTCGCCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCGAATATTTTAAAACCATCTTTAGCACGAGGAGAGTTGCAATGTATTGGGGCGACAACTTTAGATGAG
TATCGCAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTTCAACCAATTCATGTTGATGAGCCAAGTTTAGAAGA
ATCGATTCAAATCTTGAAAGGTTTACGTGACCGTTATGAGGCGCATCACCGTGTATCTATTACAGATGACGCTATTGATG
CAGCAGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTACCGGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAAGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAGATTCGAAAAGA
AAAAGATGCGGCTGTACAAAGTCAAGAATTTGAAAAGGCTGCATCTTTACGTGATATGGAACAACGCTTACGAGAGAAGT
TAGAAGATACAAAACGTCAATGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACGCGTATCCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCATGATCGTTTAATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCAAAAGCTGTTCGTCGTGCGAGAGCAGGATTAAAAG
ATCCGAAGCGCCCAATTGGTTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACAGAACTTGCAAGAGCACTAGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCAGAGTACATGGAGAAGCATTCTACTTCCCGTTT
AGTTGGTTCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGCAAGCCATATTCAG
TTGTCTTATTAGATGAGGTAGAGAAAGCTCATCCGGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGTCGTTTA
ACCGATTCTAAAGGACGTACAGTAGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGGGCAGATGCATTAAA
ACGTAATAAGTATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCGGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATCGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATCGAATTGCAATTAACAGAAGG
GGCAATTTCTGCTATTGCTGATAAAGGATTTGATCGTGAGTACGGTGCTCGTCCGCTTCGTAGGGCAATTCAGAAGCATG
TAGAAGATAGACTATCTGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGGCGTGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAGGTTATTGAATTATCTATGGATGAAGCGCGTAAGCTAGGCCATTCTTACGTTGGAACAGAACA
CATTTTACTCGGTTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGTGTAAGTTTAAATAAAG
CGAGACAACAAGTGTTACAACTTCTTGGAAGTAATGAAGCTAGTTCAGGTCATCAAGGTGGTTCAGCAACAAATGCAAAT
ACACCGACACTTGACAGTTTAGCAAGGGACTTAACAGTTGTTGCACGTGAAAATCGCTTAGACCCTGTTATTGGACGTGG
TAAAGAAATTCAACGTGTAATTGAGGTGTTAAGCCGTAGAACGAAAAACAACCCAGTATTAATCGGTGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGACATGGGTACAGTAGTAGCTGGAACGAAATATCGCGGTGAATTTGAAGACCGTTTAAAGAAAGTGATGGA
TGAAATTCGCCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCGAATATTTTAAAACCATCTTTAGCACGAGGAGAGTTGCAATGTATTGGGGCGACAACTTTAGATGAG
TATCGCAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTTCAACCAATTCATGTTGATGAGCCAAGTTTAGAAGA
ATCGATTCAAATCTTGAAAGGTTTACGTGACCGTTATGAGGCGCATCACCGTGTATCTATTACAGATGACGCTATTGATG
CAGCAGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTACCGGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAAGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAGATTCGAAAAGA
AAAAGATGCGGCTGTACAAAGTCAAGAATTTGAAAAGGCTGCATCTTTACGTGATATGGAACAACGCTTACGAGAGAAGT
TAGAAGATACAAAACGTCAATGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACGCGTATCCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCATGATCGTTTAATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCAAAAGCTGTTCGTCGTGCGAGAGCAGGATTAAAAG
ATCCGAAGCGCCCAATTGGTTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACAGAACTTGCAAGAGCACTAGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCAGAGTACATGGAGAAGCATTCTACTTCCCGTTT
AGTTGGTTCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGCAAGCCATATTCAG
TTGTCTTATTAGATGAGGTAGAGAAAGCTCATCCGGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGTCGTTTA
ACCGATTCTAAAGGACGTACAGTAGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGGGCAGATGCATTAAA
ACGTAATAAGTATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCGGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATCGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATCGAATTGCAATTAACAGAAGG
GGCAATTTCTGCTATTGCTGATAAAGGATTTGATCGTGAGTACGGTGCTCGTCCGCTTCGTAGGGCAATTCAGAAGCATG
TAGAAGATAGACTATCTGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.926 |
99.877 |
0.858 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
46.209 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.718 |
100 |
0.467 |
| clpC | Streptococcus mutans UA159 |
44.881 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.55 |
98.274 |
0.457 |
| clpC | Streptococcus pneumoniae Rx1 |
46.55 |
98.274 |
0.457 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.25 |
98.644 |
0.456 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.55 |
79.778 |
0.419 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.98 |
84.587 |
0.414 |