Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | A6J74_RS06960 | Genome accession | NZ_CP020437 |
| Coordinates | 1034723..1035010 (-) | Length | 95 a.a. |
| NCBI ID | WP_000648323.1 | Uniprot ID | A0A1V6LCK0 |
| Organism | Bacillus sp. FDAARGOS_235 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1029723..1040010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J74_RS06930 (A6J74_06925) | - | 1030494..1031021 (-) | 528 | WP_001019819.1 | DinB family protein | - |
| A6J74_RS06935 (A6J74_06930) | - | 1031216..1031563 (+) | 348 | WP_000426317.1 | DUF4257 domain-containing protein | - |
| A6J74_RS06940 (A6J74_06935) | - | 1031648..1031872 (+) | 225 | WP_000162608.1 | hypothetical protein | - |
| A6J74_RS06945 (A6J74_06940) | - | 1032119..1033054 (-) | 936 | WP_000874084.1 | aldo/keto reductase | - |
| A6J74_RS06950 (A6J74_06945) | - | 1033163..1033471 (+) | 309 | WP_001259900.1 | helix-turn-helix transcriptional regulator | - |
| A6J74_RS06955 (A6J74_06950) | - | 1033512..1034462 (-) | 951 | WP_001089054.1 | serine protease | - |
| A6J74_RS06960 (A6J74_06955) | abrB | 1034723..1035010 (-) | 288 | WP_000648323.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| A6J74_RS06965 (A6J74_06960) | - | 1035125..1037005 (-) | 1881 | WP_001026007.1 | FtsX-like permease family protein | - |
| A6J74_RS06970 (A6J74_06965) | nadE | 1037279..1038097 (+) | 819 | WP_000174902.1 | ammonia-dependent NAD(+) synthetase | - |
| A6J74_RS06975 (A6J74_06970) | - | 1038140..1038601 (-) | 462 | WP_000796418.1 | NUDIX hydrolase | - |
| A6J74_RS06980 (A6J74_06975) | - | 1038731..1038928 (-) | 198 | WP_000362874.1 | DUF4083 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10635.40 Da Isoelectric Point: 5.8675
>NTDB_id=223036 A6J74_RS06960 WP_000648323.1 1034723..1035010(-) (abrB) [Bacillus sp. FDAARGOS_235]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVDEDKVILQKYEPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLKKSEI
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVDEDKVILQKYEPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLKKSEI
Nucleotide
Download Length: 288 bp
>NTDB_id=223036 A6J74_RS06960 WP_000648323.1 1034723..1035010(-) (abrB) [Bacillus sp. FDAARGOS_235]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTAAGAGATGTATTAGG
TATACAAATTAAATCACCACTTGAAATTTTCGTAGATGAAGATAAAGTCATTTTACAAAAATATGAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAGAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAAAAAAAGTGAGATTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTAAGAGATGTATTAGG
TATACAAATTAAATCACCACTTGAAATTTTCGTAGATGAAGATAAAGTCATTTTACAAAAATATGAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAGAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAAAAAAAGTGAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.044 |
95.789 |
0.537 |