Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   A6J72_RS03650 Genome accession   NZ_CP020433
Coordinates   747329..748060 (-) Length   243 a.a.
NCBI ID   WP_003073841.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_233     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 742329..753060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J72_RS03625 (A6J72_03630) rimP 743013..743501 (-) 489 WP_003070356.1 ribosome maturation factor RimP -
  A6J72_RS03630 (A6J72_03635) - 743713..744405 (-) 693 WP_003073834.1 VIT family protein -
  A6J72_RS03635 (A6J72_03640) trmB 744806..745441 (-) 636 WP_003078354.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  A6J72_RS03640 (A6J72_03645) ccrZ 745438..746235 (-) 798 WP_003073837.1 cell cycle regulator CcrZ -
  A6J72_RS03645 (A6J72_03650) - 746286..747332 (-) 1047 WP_082311803.1 ABC transporter permease -
  A6J72_RS03650 (A6J72_03655) pptA 747329..748060 (-) 732 WP_003073841.1 ABC transporter ATP-binding protein Regulator
  A6J72_RS03655 (A6J72_03660) - 748129..748539 (+) 411 WP_003073842.1 HIT family protein -
  A6J72_RS03660 (A6J72_03665) - 748549..748836 (+) 288 WP_003078430.1 hypothetical protein -
  A6J72_RS03665 (A6J72_03670) brpA 748880..749983 (-) 1104 WP_003073846.1 biofilm formation/cell division transcriptional regulator BrpA -
  A6J72_RS03670 (A6J72_03675) - 749991..750512 (-) 522 WP_009568049.1 GNAT family N-acetyltransferase -
  A6J72_RS03675 (A6J72_03680) tsaE 750505..750945 (-) 441 WP_009568047.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  A6J72_RS03680 (A6J72_03690) - 751283..752722 (-) 1440 WP_082311805.1 NCS2 family permease -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27036.50 Da        Isoelectric Point: 4.5977

>NTDB_id=222993 A6J72_RS03650 WP_003073841.1 747329..748060(-) (pptA) [Streptococcus intermedius strain FDAARGOS_233]
MLEIKGLTGGYINIPVLKDISFTVENGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDNPMGYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVDQEVAFARVEQLLTKFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLKDEKTKGKSILMSTHVLDSAERMCDSFVILHKGEIRAKGNLSELQSEFSMPEASLNEIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=222993 A6J72_RS03650 WP_003073841.1 747329..748060(-) (pptA) [Streptococcus intermedius strain FDAARGOS_233]
ATGTTAGAAATAAAAGGGCTTACAGGCGGATATATAAATATCCCTGTTTTAAAAGATATCAGTTTCACGGTAGAAAATGG
TGAGCTGGTGGGCTTAATTGGTTTGAATGGTGCTGGAAAGTCTACAACAATCAATGAAATTATTGGACTTTTAACTCCTT
ATAAAGGGGAAATTTTAATTGACGGCGCTAAACTGCAAGATAATCCCATGGGTTATCGTAAGAAAATTGGATTTATTCCA
GAGACCCCTAGTTTATATGAGGAATTGACTTTAAGAGAGCACATTGAAACAGTTGCTATGGCTTATGATGTCGATCAAGA
GGTAGCTTTTGCGCGCGTGGAACAATTATTGACCAAGTTTCGCTTGAAAGAAAAATTGGATTGGTTCCCCGTTCACTTTT
CAAAGGGAATGAAGCAAAAAGTCATGATTATTTGCGCCTTTGTAGTTGATCCGAGTCTCTTTATCGTAGATGAGCCATTT
TTGGGACTCGATCCAGTAGCGATTGCTGATTTGATAGAGCTTTTGAAAGATGAAAAGACGAAAGGCAAATCTATCCTGAT
GAGTACGCATGTGTTGGACTCAGCAGAAAGAATGTGTGATTCATTCGTGATTTTGCACAAGGGGGAAATCCGAGCGAAAG
GTAACTTATCAGAGTTGCAATCAGAATTTTCTATGCCAGAAGCTAGCCTGAATGAGATCTATCTGGCATTGACAGAAGAG
GCAAGTCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.13

98.354

0.7
  pptA Streptococcus salivarius strain HSISS4

70.711

98.354

0.695

Multiple sequence alignment