Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | A6J72_RS03035 | Genome accession | NZ_CP020433 |
| Coordinates | 612919..613974 (-) | Length | 351 a.a. |
| NCBI ID | WP_003078259.1 | Uniprot ID | - |
| Organism | Streptococcus intermedius strain FDAARGOS_233 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 607919..618974
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J72_RS03000 (A6J72_02995) | - | 608239..608619 (-) | 381 | WP_048784911.1 | rhodanese-like domain-containing protein | - |
| A6J72_RS03005 (A6J72_03000) | - | 608613..608837 (-) | 225 | WP_003073604.1 | YqgQ family protein | - |
| A6J72_RS03010 (A6J72_03005) | - | 609100..609627 (-) | 528 | WP_021003028.1 | Dps family protein | - |
| A6J72_RS03015 (A6J72_03010) | cclA/cilC | 609778..610461 (+) | 684 | WP_082311745.1 | A24 family peptidase | Machinery gene |
| A6J72_RS03020 (A6J72_03015) | - | 610447..610965 (-) | 519 | WP_082311746.1 | VanZ family protein | - |
| A6J72_RS03025 (A6J72_03020) | rlmN | 610958..612040 (-) | 1083 | WP_009568160.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| A6J72_RS03030 (A6J72_03025) | - | 612074..612637 (-) | 564 | WP_003073618.1 | YutD family protein | - |
| A6J72_RS03035 (A6J72_03030) | sepM | 612919..613974 (-) | 1056 | WP_003078259.1 | SepM family pheromone-processing serine protease | Regulator |
| A6J72_RS03040 (A6J72_03035) | coaD | 613955..614452 (-) | 498 | WP_003078294.1 | pantetheine-phosphate adenylyltransferase | - |
| A6J72_RS03045 (A6J72_03040) | rsmD | 614442..614981 (-) | 540 | WP_082311747.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| A6J72_RS03050 (A6J72_03045) | hpf | 615180..615722 (-) | 543 | WP_003073626.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| A6J72_RS03055 (A6J72_03050) | - | 615801..616466 (-) | 666 | WP_003078227.1 | ComF family protein | - |
| A6J72_RS03060 (A6J72_03055) | - | 616463..617763 (-) | 1301 | Protein_602 | DEAD/DEAH box helicase | - |
| A6J72_RS03065 (A6J72_03060) | - | 617820..618455 (+) | 636 | WP_082311748.1 | YigZ family protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 38507.52 Da Isoelectric Point: 10.2603
>NTDB_id=222988 A6J72_RS03035 WP_003078259.1 612919..613974(-) (sepM) [Streptococcus intermedius strain FDAARGOS_233]
MKKTRNKFKKWPIVFVVGLVLLFISFVVPLPYYIEVPGSAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDISLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFSSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSSIPIEFSTAGIGGPSAGL
MFSLAIYTQIAEPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEAKKANSKAKTNYETAL
ETAKKIKTKMKIVPVKNLQDAIDYLKRTKKS
MKKTRNKFKKWPIVFVVGLVLLFISFVVPLPYYIEVPGSAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDISLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFSSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSSIPIEFSTAGIGGPSAGL
MFSLAIYTQIAEPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEAKKANSKAKTNYETAL
ETAKKIKTKMKIVPVKNLQDAIDYLKRTKKS
Nucleotide
Download Length: 1056 bp
>NTDB_id=222988 A6J72_RS03035 WP_003078259.1 612919..613974(-) (sepM) [Streptococcus intermedius strain FDAARGOS_233]
ATGAAAAAAACAAGAAATAAATTTAAAAAATGGCCGATAGTATTTGTAGTAGGGTTGGTTCTTCTTTTTATCTCTTTTGT
AGTTCCTCTGCCTTATTATATTGAAGTACCAGGTAGTGCAGCAGACGTCCGCCAGGTTTTGCGTGTGGATAACAAAGAAG
ATAAGGAAAAAGGTTCTTACAATTTTGTGACAGTTGGGATTCAGCATGCTACCTTTGCTCATTTAGTTTATGCTTGGCTG
ACCCCTTTTACAGATATTTATTCAGCGAAAGATTTGACTGGCGGAACTTCCGATAAAGAATATATGCGAATCAATCAATT
TTATATGGAAACATCACAAAACTTAGCCAAATATCAAGGGTTAAAAAAAGCAGGAAAGGATATCAGCCTGAAATATTTGG
GCGTCTATGTGTTACAAGTTACCAAAAACTCAACCTTTAAGGGCATTTTAAATATTGCAGATACTGTGACAGGTGTGAAT
GATAAGACTTTTAGTAGTTCAAAAGACTTGATTGATTATGTAGGTTCACAGAAGATTGGTAGTAAGGTAAAAGTAAATTA
TGTTGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATCATCAAACTTGAAAATGGGAAAAATGGAATTGGTATTAGCT
TGATTGACCGGACAGAGGTTACGAGTAGTATACCGATTGAATTCTCAACTGCGGGAATTGGCGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACACAGATTGCTGAACCAACATTAAGAGACGGTAGAAATATTGCTGGTACGGGCTCAAT
TGACCGTGAAGGAAAAGTTGGCGATATTGGAGGCATTGATAAAAAGGTGGTCTCAGCAGCCAAAAATGGTGCAGAAATTT
TCTTTGCACCAAATAATCCAGTCACCAAAGAAGCTAAAAAAGCCAATTCTAAAGCGAAAACAAATTATGAAACAGCTTTG
GAAACTGCTAAAAAAATTAAAACCAAAATGAAAATTGTACCTGTCAAGAACTTGCAAGATGCTATTGATTACCTCAAACG
CACCAAGAAATCTTAA
ATGAAAAAAACAAGAAATAAATTTAAAAAATGGCCGATAGTATTTGTAGTAGGGTTGGTTCTTCTTTTTATCTCTTTTGT
AGTTCCTCTGCCTTATTATATTGAAGTACCAGGTAGTGCAGCAGACGTCCGCCAGGTTTTGCGTGTGGATAACAAAGAAG
ATAAGGAAAAAGGTTCTTACAATTTTGTGACAGTTGGGATTCAGCATGCTACCTTTGCTCATTTAGTTTATGCTTGGCTG
ACCCCTTTTACAGATATTTATTCAGCGAAAGATTTGACTGGCGGAACTTCCGATAAAGAATATATGCGAATCAATCAATT
TTATATGGAAACATCACAAAACTTAGCCAAATATCAAGGGTTAAAAAAAGCAGGAAAGGATATCAGCCTGAAATATTTGG
GCGTCTATGTGTTACAAGTTACCAAAAACTCAACCTTTAAGGGCATTTTAAATATTGCAGATACTGTGACAGGTGTGAAT
GATAAGACTTTTAGTAGTTCAAAAGACTTGATTGATTATGTAGGTTCACAGAAGATTGGTAGTAAGGTAAAAGTAAATTA
TGTTGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATCATCAAACTTGAAAATGGGAAAAATGGAATTGGTATTAGCT
TGATTGACCGGACAGAGGTTACGAGTAGTATACCGATTGAATTCTCAACTGCGGGAATTGGCGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACACAGATTGCTGAACCAACATTAAGAGACGGTAGAAATATTGCTGGTACGGGCTCAAT
TGACCGTGAAGGAAAAGTTGGCGATATTGGAGGCATTGATAAAAAGGTGGTCTCAGCAGCCAAAAATGGTGCAGAAATTT
TCTTTGCACCAAATAATCCAGTCACCAAAGAAGCTAAAAAAGCCAATTCTAAAGCGAAAACAAATTATGAAACAGCTTTG
GAAACTGCTAAAAAAATTAAAACCAAAATGAAAATTGTACCTGTCAAGAACTTGCAAGATGCTATTGATTACCTCAAACG
CACCAAGAAATCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
63.188 |
98.291 |
0.621 |