Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | A6J68_RS02180 | Genome accession | NZ_CP020432 |
| Coordinates | 389339..390313 (+) | Length | 324 a.a. |
| NCBI ID | WP_001008571.1 | Uniprot ID | - |
| Organism | Streptococcus sp. 'group B' strain FDAARGOS_229 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 384339..395313
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J68_RS02150 (A6J68_02145) | - | 386125..386490 (+) | 366 | WP_000285373.1 | DUF1033 family protein | - |
| A6J68_RS02160 (A6J68_02155) | comYA | 386662..387633 (+) | 972 | WP_000250797.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A6J68_RS02165 (A6J68_02160) | comYB | 387527..388570 (+) | 1044 | WP_223297804.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A6J68_RS02170 (A6J68_02165) | comGF | 388595..389023 (+) | 429 | WP_223842274.1 | competence type IV pilus minor pilin ComGF | - |
| A6J68_RS02175 (A6J68_02170) | comGG | 389001..389224 (+) | 224 | Protein_369 | competence type IV pilus minor pilin ComGG | - |
| A6J68_RS02180 (A6J68_02175) | comYH | 389339..390313 (+) | 975 | WP_001008571.1 | class I SAM-dependent methyltransferase | Machinery gene |
| A6J68_RS02185 (A6J68_02180) | - | 390345..391538 (+) | 1194 | WP_000047534.1 | acetate kinase | - |
| A6J68_RS02190 (A6J68_02185) | - | 391689..391895 (+) | 207 | WP_000798241.1 | helix-turn-helix transcriptional regulator | - |
| A6J68_RS02195 (A6J68_02190) | - | 391954..392091 (+) | 138 | WP_001869149.1 | hypothetical protein | - |
| A6J68_RS02200 (A6J68_02195) | - | 392132..392587 (+) | 456 | WP_000905672.1 | hypothetical protein | - |
| A6J68_RS02205 (A6J68_02200) | - | 392656..393321 (+) | 666 | WP_000008107.1 | CPBP family intramembrane glutamic endopeptidase | - |
| A6J68_RS02210 (A6J68_02205) | proC | 393342..394112 (-) | 771 | WP_001869147.1 | pyrroline-5-carboxylate reductase | - |
| A6J68_RS02215 (A6J68_02210) | pepA | 394182..395249 (-) | 1068 | WP_001281321.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37086.96 Da Isoelectric Point: 4.4041
>NTDB_id=222933 A6J68_RS02180 WP_001008571.1 389339..390313(+) (comYH) [Streptococcus sp. 'group B' strain FDAARGOS_229]
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
Nucleotide
Download Length: 975 bp
>NTDB_id=222933 A6J68_RS02180 WP_001008571.1 389339..390313(+) (comYH) [Streptococcus sp. 'group B' strain FDAARGOS_229]
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCCGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCCGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
67.302 |
97.222 |
0.654 |
| comYH | Streptococcus mutans UA140 |
67.302 |
97.222 |
0.654 |