Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   A6J31_RS08785 Genome accession   NZ_CP020431
Coordinates   1721964..1722674 (+) Length   236 a.a.
NCBI ID   WP_080610997.1    Uniprot ID   A0A1V0GFC1
Organism   Streptococcus sp. FDAARGOS_192     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1716964..1727674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS08775 (A6J31_08710) treC 1718177..1719802 (-) 1626 WP_080610993.1 alpha,alpha-phosphotrehalase -
  A6J31_RS08780 (A6J31_08715) treP 1719858..1721807 (-) 1950 WP_080610995.1 PTS system trehalose-specific EIIBC component -
  A6J31_RS08785 (A6J31_08720) treR 1721964..1722674 (+) 711 WP_080610997.1 trehalose operon repressor Regulator
  A6J31_RS08790 (A6J31_08725) - 1722728..1723288 (-) 561 WP_014635136.1 TIGR01440 family protein -
  A6J31_RS08795 (A6J31_08730) - 1723304..1723642 (-) 339 WP_080610999.1 hypothetical protein -
  A6J31_RS08800 (A6J31_08735) - 1723675..1724031 (-) 357 WP_002892073.1 hypothetical protein -
  A6J31_RS08805 (A6J31_08740) - 1724322..1725203 (-) 882 WP_080611001.1 class II fructose-bisphosphate aldolase -
  A6J31_RS08815 (A6J31_08750) - 1725627..1726922 (-) 1296 WP_080611003.1 gamma-glutamylcysteine synthetase -
  A6J31_RS08820 (A6J31_08755) rplQ 1727172..1727558 (-) 387 WP_002885709.1 50S ribosomal protein L17 -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27341.02 Da        Isoelectric Point: 6.8431

>NTDB_id=222899 A6J31_RS08785 WP_080610997.1 1721964..1722674(+) (treR) [Streptococcus sp. FDAARGOS_192]
MKKYQIIYKDLEKAIHEQKYQVGDFLPTEQELVQSYQVSRDTIRKALTLLVEEGLVKKIHGSGSQVINQEQINFPVSDLT
SYQELIEQQGLNSQTNVISLDKIIVDSKLSERTGFSNSRQVWRVVRQRVVDSCASVIDIDYLDASLVPQLNRSIAEYSIY
DYIENLLNLSISHAFKEITIDNATDQDKILIDLGKDQHVVCVRSKVYLNNGKQFQFTESRHKLEKFKFVDYAKRHH

Nucleotide


Download         Length: 711 bp        

>NTDB_id=222899 A6J31_RS08785 WP_080610997.1 1721964..1722674(+) (treR) [Streptococcus sp. FDAARGOS_192]
ATGAAAAAATATCAGATTATTTATAAGGATTTAGAAAAAGCTATCCATGAGCAAAAGTATCAAGTGGGAGACTTTCTCCC
CACCGAGCAAGAACTGGTTCAATCTTACCAGGTTAGTCGAGACACTATACGAAAAGCATTAACCTTACTCGTTGAAGAAG
GATTGGTCAAAAAGATTCATGGCTCTGGCTCTCAGGTTATTAACCAGGAACAAATCAACTTTCCTGTGTCTGACCTCACT
AGTTACCAGGAGCTAATAGAACAACAAGGCCTTAATTCGCAAACCAACGTTATTTCTCTGGATAAAATCATTGTTGATTC
AAAACTCTCAGAAAGAACTGGTTTTTCTAATAGCCGACAGGTTTGGCGTGTTGTTCGTCAAAGAGTCGTTGATAGCTGTG
CCTCTGTTATAGATATTGATTACCTAGATGCAAGCCTTGTTCCTCAACTAAACCGTAGCATTGCTGAATACTCTATTTAC
GACTACATTGAGAATCTGCTCAACCTTAGCATTTCCCACGCCTTTAAAGAAATCACTATCGATAATGCTACCGATCAGGA
TAAGATTCTTATCGACCTAGGTAAGGACCAGCACGTTGTCTGTGTCCGTTCAAAAGTTTATTTAAACAATGGAAAACAGT
TCCAATTTACGGAAAGTCGCCACAAACTTGAAAAATTCAAATTTGTTGATTATGCCAAGCGCCATCATTAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(88-227)

Bacterial regulatory proteins, gntR family (GntR)

(4-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V0GFC1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

60.426

99.576

0.602

Multiple sequence alignment