Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SAG_RS11145 | Genome accession | NC_004116 |
| Coordinates | 1707714..1708205 (-) | Length | 163 a.a. |
| NCBI ID | WP_000609585.1 | Uniprot ID | A0AAV3JH34 |
| Organism | Streptococcus agalactiae 2603V/R | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1702714..1713205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAG_RS11130 (SAG1710) | - | 1705620..1706291 (-) | 672 | WP_000174846.1 | DUF1129 domain-containing protein | - |
| SAG_RS11135 (SAG1711) | - | 1706316..1707260 (-) | 945 | WP_000812121.1 | magnesium transporter CorA family protein | - |
| SAG_RS11140 (SAG1712) | rpsR | 1707430..1707669 (-) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| SAG_RS11145 (SAG1713) | ssbA | 1707714..1708205 (-) | 492 | WP_000609585.1 | single-stranded DNA-binding protein | Machinery gene |
| SAG_RS11150 (SAG1714) | rpsF | 1708217..1708504 (-) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| SAG_RS11155 (SAG1715) | mutY | 1709568..1710722 (+) | 1155 | WP_161512236.1 | A/G-specific adenine glycosylase | - |
| SAG_RS11160 (SAG1716) | - | 1710899..1711492 (+) | 594 | WP_000402394.1 | helix-turn-helix domain-containing protein | - |
| SAG_RS11165 (SAG1717) | trxA | 1711538..1711870 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| SAG_RS11170 (SAG1718) | - | 1711933..1712433 (-) | 501 | WP_000446812.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18165.81 Da Isoelectric Point: 4.9119
>NTDB_id=22287 SAG_RS11145 WP_000609585.1 1707714..1708205(-) (ssbA) [Streptococcus agalactiae 2603V/R]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=22287 SAG_RS11145 WP_000609585.1 1707714..1708205(-) (ssbA) [Streptococcus agalactiae 2603V/R]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |