Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   A6J31_RS02210 Genome accession   NZ_CP020431
Coordinates   237561..238562 (+) Length   333 a.a.
NCBI ID   WP_014634136.1    Uniprot ID   A0A1V0H5P5
Organism   Streptococcus sp. FDAARGOS_192     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 232561..243562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS02190 (A6J31_02165) smpB 233682..234146 (+) 465 WP_014634133.1 SsrA-binding protein SmpB -
  A6J31_RS02195 (A6J31_02170) - 234293..235699 (+) 1407 WP_014634134.1 Cof-type HAD-IIB family hydrolase -
  A6J31_RS02200 (A6J31_02175) - 235701..236069 (+) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  A6J31_RS02205 (A6J31_02180) - 236166..237248 (-) 1083 WP_014634135.1 M24 family metallopeptidase -
  A6J31_RS02210 (A6J31_02185) ccpA 237561..238562 (+) 1002 WP_014634136.1 catabolite control protein A Regulator
  A6J31_RS02215 (A6J31_02190) - 238622..239689 (+) 1068 WP_014634137.1 MmcQ/YjbR family DNA-binding protein -
  A6J31_RS02220 (A6J31_02195) - 239702..240817 (+) 1116 WP_021144480.1 glycerate kinase -
  A6J31_RS02225 (A6J31_02200) - 240848..241303 (-) 456 WP_021144479.1 YueI family protein -
  A6J31_RS02230 (A6J31_02205) eno 241509..242813 (+) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  A6J31_RS02235 (A6J31_02210) - 242963..243148 (-) 186 WP_002890454.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=222862 A6J31_RS02210 WP_014634136.1 237561..238562(+) (ccpA) [Streptococcus sp. FDAARGOS_192]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=222862 A6J31_RS02210 WP_014634136.1 237561..238562(+) (ccpA) [Streptococcus sp. FDAARGOS_192]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTTATTCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCTACGATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCATGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACGCCGATTGTTCTAGCAGGAACAGTAGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTGTAACGCAGCTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCGGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H5P5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment