Detailed information    

insolico Bioinformatically predicted

Overview


Name   pepF   Type   Regulator
Locus tag   A6J31_RS01265 Genome accession   NZ_CP020431
Coordinates   39694..41499 (+) Length   601 a.a.
NCBI ID   WP_014633984.1    Uniprot ID   A0A1V0GB58
Organism   Streptococcus sp. FDAARGOS_192     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context


Location: 34694..46499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS01255 (A6J31_01240) - 35485..37422 (+) 1938 WP_080610287.1 GbpC/Spa domain-containing protein -
  A6J31_RS01260 (A6J31_01245) - 38724..39683 (+) 960 WP_080610288.1 competence protein CoiA -
  A6J31_RS01265 (A6J31_01250) pepF 39694..41499 (+) 1806 WP_014633984.1 oligoendopeptidase F Regulator
  A6J31_RS01270 (A6J31_01255) - 41711..42931 (+) 1221 WP_080610289.1 OFA family MFS transporter -
  A6J31_RS01275 (A6J31_01260) - 43003..43710 (+) 708 WP_070839719.1 O-methyltransferase -
  A6J31_RS01280 (A6J31_01265) - 43772..44914 (+) 1143 WP_014633987.1 peptidyl-prolyl cis-trans isomerase -
  A6J31_RS01285 (A6J31_01270) - 45253..45738 (+) 486 WP_064520603.1 LURP-one-related/scramblase family protein -

Sequence


Protein


Download         Length: 601 a.a.        Molecular weight: 69084.09 Da        Isoelectric Point: 4.5414

>NTDB_id=222857 A6J31_RS01265 WP_014633984.1 39694..41499(+) (pepF) [Streptococcus sp. FDAARGOS_192]
MSDNRAHLEEKYTWDLTTIFATDADWETEYESTVQDLKKASAYAGHLLDSAKNLLEATELYMSLMRRLEKIYVYASMKND
QDTTVGLYQEYQAKASNLYSQLSEAFAYFEPEFMALDDKKLAEFKEQEPGLGLYDHYFERLLANKDHVLSQEAEELLAAA
GDIFNGPTDTFNVLDNADILFPWVSDGQGDVVELTHGNFITLMESKDRDIRKGAYEAMYGTYEQFQHTYAQTLQGVVKVH
NYQAKVRHYNSARHAALAANFIPESVYDSLLESVNKHLPLLHRYLDLRKKVLGLDELKMYDVYTPLSETETALTYEESLK
KAEEVLAIFGEEYSKGVHAAFTERWIDVHPNKGKRSGAYSGGAYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTRQT
QPYVYGDYPIFLAEIASTTNENILTETLLKEVKDDKTRFAILNHYLDGFKGTVFRQTQFAEFEHAIHEADASGQILTADF
MNKLYADLNEKYYNLKAEDNYEIQFEWERIPHFYMNYYVYQYATGFAAASYLAEKIVHGTEEDKEAYLTYLKAGSSDYPL
EVIKKAGVDMTNTDYLDAAFKVFEDRLVELEDLVEKGVHLS

Nucleotide


Download         Length: 1806 bp        

>NTDB_id=222857 A6J31_RS01265 WP_014633984.1 39694..41499(+) (pepF) [Streptococcus sp. FDAARGOS_192]
ATGTCAGACAATCGTGCTCATTTAGAAGAGAAATACACATGGGATTTGACGACCATTTTTGCGACAGATGCAGATTGGGA
GACTGAGTATGAAAGCACTGTTCAGGATTTGAAGAAGGCTAGTGCTTATGCAGGTCATCTCTTAGATTCTGCTAAGAACT
TGCTTGAGGCAACAGAACTTTATATGAGCCTTATGCGTCGCTTGGAGAAAATCTATGTCTATGCGTCAATGAAAAATGAC
CAAGACACAACAGTAGGGCTTTACCAAGAGTACCAAGCTAAGGCCTCAAACCTTTACTCACAGTTGAGTGAAGCCTTTGC
ATACTTTGAGCCTGAATTTATGGCCTTGGATGATAAGAAATTAGCTGAGTTTAAAGAACAAGAGCCAGGTCTTGGACTTT
ATGACCACTATTTCGAACGCCTTTTGGCAAACAAGGACCACGTTCTTTCTCAAGAAGCTGAGGAGCTCTTGGCAGCAGCA
GGTGATATCTTCAACGGTCCAACGGATACCTTCAATGTTTTGGATAATGCTGATATCCTCTTCCCATGGGTATCAGATGG
TCAAGGGGATGTGGTTGAGTTGACACATGGTAACTTTATCACCCTCATGGAATCTAAGGACCGTGACATTCGTAAGGGAG
CTTATGAAGCGATGTATGGGACCTACGAGCAGTTCCAACATACTTATGCACAAACACTCCAAGGCGTTGTCAAGGTTCAC
AATTACCAAGCCAAAGTTCGTCACTATAATTCAGCACGTCATGCAGCACTTGCAGCTAACTTTATTCCAGAAAGTGTTTA
TGATTCACTCTTGGAATCAGTGAACAAGCATTTGCCACTTTTGCATCGTTACCTTGATTTGCGTAAGAAGGTCTTGGGGC
TTGACGAGCTTAAGATGTATGATGTCTATACACCACTTTCTGAGACTGAAACTGCTCTTACTTATGAAGAATCCCTCAAG
AAAGCAGAAGAAGTCTTGGCAATCTTTGGTGAAGAGTATAGTAAAGGGGTTCATGCAGCCTTTACGGAACGTTGGATTGA
CGTTCACCCTAACAAAGGAAAACGTTCAGGTGCTTACTCAGGTGGTGCCTATGATACCAATGCTTTCATGCTTTTGAACT
GGCAAGATACTTTGGACAATCTCTTTACCTTGGTTCACGAGACTGGTCATAGTTTGCATTCAACGTTCACACGTCAGACT
CAACCATATGTTTACGGAGATTACCCAATCTTCTTGGCGGAAATTGCGTCTACAACCAATGAAAATATCTTGACAGAAAC
GCTTCTTAAAGAGGTCAAAGATGACAAGACACGTTTTGCTATTCTTAACCACTATTTGGATGGTTTCAAGGGAACTGTCT
TCCGTCAAACACAATTTGCAGAGTTTGAACATGCTATCCATGAAGCAGATGCATCTGGTCAAATCTTGACAGCCGACTTC
ATGAATAAGCTTTACGCAGATCTCAATGAGAAATACTATAATCTCAAAGCTGAAGATAACTACGAAATTCAGTTTGAGTG
GGAACGTATTCCGCATTTCTACATGAATTACTATGTCTACCAATACGCTACAGGGTTTGCGGCAGCAAGCTACTTGGCTG
AAAAAATTGTTCATGGTACTGAAGAAGATAAGGAAGCTTACCTTACTTACCTTAAGGCGGGAAGCTCAGACTATCCTTTG
GAAGTCATCAAGAAAGCTGGTGTTGATATGACCAATACCGACTACTTGGATGCTGCCTTCAAAGTTTTTGAAGACCGTCT
CGTTGAATTGGAAGACTTGGTTGAAAAAGGTGTTCACCTTTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0GB58

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

99.501

100

0.995


Multiple sequence alignment