Detailed information NTG0222818

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: A6J30_RS07780
• Genome accession: NZ_CP020427
• Coordinates: 1606347..1607354 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain FDAARGOS_191
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1601347..1612354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J30_RS07755 (A6J30_07500)	rplC	1601881..1602510 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
A6J30_RS07760 (A6J30_07505)	rpsJ	1602525..1602836 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
A6J30_RS07765 (A6J30_07510)	rpmE	1603294..1603515 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
A6J30_RS07775 (A6J30_07515)	priA	1603810..1606014 (+)	2205	WP_005481427.1	primosomal protein N'	-
A6J30_RS07780 (A6J30_07520)	cytR	1606347..1607354 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
A6J30_RS07785 (A6J30_07525)	ftsN	1607531..1608076 (+)	546	WP_005481405.1	cell division protein FtsN	-
A6J30_RS07790 (A6J30_07530)	hslV	1608241..1608792 (+)	552	WP_005455873.1	ATP-dependent protease subunit HslV	-
A6J30_RS07795 (A6J30_07535)	hslU	1608816..1610147 (+)	1332	WP_005457198.1	HslU--HslV peptidase ATPase subunit	-
A6J30_RS07800 (A6J30_07540)	-	1610332..1611249 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
A6J30_RS07805 (A6J30_07545)	rraA	1611326..1611838 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
A6J30_RS07810 (A6J30_07550)	zapB	1611943..1612185 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=222818 A6J30_RS07780 WP_005481416.1 1606347..1607354(+) (cytR) [Vibrio parahaemolyticus strain FDAARGOS_191]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=222818 A6J30_RS07780 WP_005481416.1 1606347..1607354(+) (cytR) [Vibrio parahaemolyticus strain FDAARGOS_191]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGTACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGCGACACCATGGCAATCGGCGCAATCCAAGAAGCCAAACGACTCGGTCTGCGCGTTCCGCAAGATTT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904