Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H97_RS05585 Genome accession   NZ_CP026038
Coordinates   1049478..1050191 (-) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis PY79 strain PK1_3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1044478..1055191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H97_RS05565 (C2H97_05585) yvcT 1044623..1045600 (+) 978 WP_072173470.1 D-glycerate dehydrogenase -
  C2H97_RS05570 (C2H97_05590) psdB 1045637..1047577 (-) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  C2H97_RS05575 (C2H97_05595) psdA 1047552..1048331 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C2H97_RS05580 (C2H97_05600) psdS 1048414..1049484 (-) 1071 WP_249847960.1 two-component sensor histidine kinase PsdS -
  C2H97_RS05585 (C2H97_05605) braR 1049478..1050191 (-) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  C2H97_RS05590 (C2H97_05610) - 1050338..1050547 (+) 210 WP_029318346.1 hypothetical protein -
  C2H97_RS05595 (C2H97_05615) yvcN 1050583..1051347 (-) 765 WP_086344361.1 arylamine N-acetyltransferase -
  C2H97_RS05600 (C2H97_05620) crh 1051348..1051605 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C2H97_RS05605 (C2H97_05625) whiA 1051629..1052579 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  C2H97_RS05610 (C2H97_05630) mgfK 1052602..1053555 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  C2H97_RS05615 (C2H97_05635) rapZ 1053557..1054444 (-) 888 WP_003243903.1 RNase adapter RapZ -
  C2H97_RS05620 (C2H97_05640) yvcI 1054469..1054945 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=222781 C2H97_RS05585 WP_003228163.1 1049478..1050191(-) (braR) [Bacillus subtilis PY79 strain PK1_3]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=222781 C2H97_RS05585 WP_003228163.1 1049478..1050191(-) (braR) [Bacillus subtilis PY79 strain PK1_3]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment