Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H97_RS03245 Genome accession   NZ_CP026038
Coordinates   599475..600170 (-) Length   231 a.a.
NCBI ID   WP_031315258.1    Uniprot ID   -
Organism   Bacillus subtilis PY79 strain PK1_3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 594475..605170
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H97_RS03225 (C2H97_03235) yttA 594902..595648 (+) 747 WP_120028503.1 LMBR1 domain-containing protein -
  C2H97_RS03230 (C2H97_03240) bceB 595685..597625 (-) 1941 WP_120028504.1 bacitracin ABC transporter permease BceB -
  C2H97_RS03235 (C2H97_03245) bceA 597615..598376 (-) 762 WP_014477722.1 bacitracin ABC transporter ATP-binding protein BceA -
  C2H97_RS03240 (C2H97_03250) bceS 598478..599482 (-) 1005 WP_021480349.1 two-component sensor histidine kinase BceS -
  C2H97_RS03245 (C2H97_03255) braR 599475..600170 (-) 696 WP_031315258.1 two-component response regulator BceR Regulator
  C2H97_RS03250 (C2H97_03260) ytrF 600267..601577 (-) 1311 WP_021480351.1 ABC transporter permease YtrF -
  C2H97_RS03255 (C2H97_03265) ytrE 601567..602262 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  C2H97_RS03260 (C2H97_03270) - 602277..603254 (-) 978 WP_120028505.1 ABC transporter permease -
  C2H97_RS03265 (C2H97_03275) ytrC 603284..604270 (-) 987 WP_021480353.1 ABC transporter permease YtrC -
  C2H97_RS03270 (C2H97_03280) ytrB 604264..605142 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26910.80 Da        Isoelectric Point: 5.3731

>NTDB_id=222771 C2H97_RS03245 WP_031315258.1 599475..600170(-) (braR) [Bacillus subtilis PY79 strain PK1_3]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFSAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=222771 C2H97_RS03245 WP_031315258.1 599475..600170(-) (braR) [Bacillus subtilis PY79 strain PK1_3]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTTCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGTGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377