Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   A6J51_RS01315 Genome accession   NZ_CP020423
Coordinates   221898..223940 (-) Length   680 a.a.
NCBI ID   WP_002256892.1    Uniprot ID   -
Organism   Neisseria meningitidis strain FDAARGOS_212     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 216898..228940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J51_RS01275 (A6J51_01250) - 216900..217526 (-) 627 WP_002234634.1 secretion protein -
  A6J51_RS01280 (A6J51_01255) - 217587..217940 (-) 354 WP_002234250.1 hypothetical protein -
  A6J51_RS14285 (A6J51_01260) - 217933..218160 (-) 228 WP_002234251.1 hypothetical protein -
  A6J51_RS01290 (A6J51_01265) - 218169..219323 (-) 1155 WP_080610875.1 cupin domain-containing protein -
  A6J51_RS01300 (A6J51_01270) - 219577..219858 (+) 282 WP_002221438.1 hypothetical protein -
  A6J51_RS01305 (A6J51_01275) argC 219855..220898 (+) 1044 WP_080610877.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  A6J51_RS01310 (A6J51_01280) - 220942..221154 (+) 213 WP_080610879.1 hypothetical protein -
  A6J51_RS13380 - 221674..221892 (-) 219 WP_143485334.1 hypothetical protein -
  A6J51_RS01315 (A6J51_01285) recG 221898..223940 (-) 2043 WP_002256892.1 ATP-dependent DNA helicase RecG Machinery gene
  A6J51_RS01320 (A6J51_01290) secB 224026..224469 (-) 444 WP_002214461.1 protein-export chaperone SecB -
  A6J51_RS01325 (A6J51_01295) grxC 224490..224747 (-) 258 WP_002221441.1 glutaredoxin 3 -
  A6J51_RS01330 (A6J51_01300) rng 224960..226453 (+) 1494 WP_002214463.1 ribonuclease G -
  A6J51_RS01335 (A6J51_01305) - 226487..227737 (-) 1251 WP_080611344.1 ATP-binding protein -
  A6J51_RS01340 (A6J51_01310) - 227733..227907 (-) 175 Protein_229 response regulator -
  A6J51_RS13385 - 227981..228211 (+) 231 WP_124202315.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74882.94 Da        Isoelectric Point: 7.8829

>NTDB_id=222748 A6J51_RS01315 WP_002256892.1 221898..223940(-) (recG) [Neisseria meningitidis strain FDAARGOS_212]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLNTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=222748 A6J51_RS01315 WP_002256892.1 221898..223940(-) (recG) [Neisseria meningitidis strain FDAARGOS_212]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGTTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGGTCGGTAA
GCGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGATGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTCGCCGCCTTGTCCGCGCTGACCGCCATCGAATCCGGTGCGCAGGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAACATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGACCATTGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAACTGCCGCCCGGGCGCACGCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCAATACTTGCCGCAAAGGGCGGCAGGCGTATTGGGTTTGTCCGCTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCTGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAATGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGTCGGGTCGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAGCTCGAAGAA
GACCTGCACCTCTTGGAACAAGCGCGCGAAATCGCCCCGATACTGATTGAGCAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGATGGCTTTCCGGCAGGGAAGGTTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

99.412

100

0.994

Multiple sequence alignment