Detailed information NTG0222633

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C2H95_RS06810
• Genome accession: NZ_CP026037
• Coordinates: 1328115..1329242 (-)
• Length: 375 a.a.
• NCBI ID: WP_072175461.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_17
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1323115..1334242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H95_RS06795 (C2H95_06765)	-	1324805..1326322 (+)	1518	WP_249849624.1	hypothetical protein	-
C2H95_RS06800 (C2H95_06770)	-	1326315..1327253 (+)	939	WP_072175459.1	hypothetical protein	-
C2H95_RS06805 (C2H95_06775)	-	1327928..1328125 (-)	198	WP_072175460.1	hypothetical protein	-
C2H95_RS06810 (C2H95_06780)	rapC	1328115..1329242 (-)	1128	WP_072175461.1	tetratricopeptide repeat protein	Regulator
C2H95_RS06815 (C2H95_06785)	-	1329433..1329736 (-)	304	Protein_1293	hypothetical protein	-
C2H95_RS06820 (C2H95_06790)	-	1329821..1330216 (-)	396	WP_042978001.1	immunity 22 family protein	-
C2H95_RS06825 (C2H95_06795)	-	1330229..1332115 (-)	1887	WP_125121420.1	T7SS effector LXG polymorphic toxin	-
C2H95_RS06830 (C2H95_06800)	-	1332282..1332620 (+)	339	WP_021481280.1	hypothetical protein	-
C2H95_RS06835 (C2H95_06805)	-	1332633..1333553 (+)	921	WP_085187015.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44409.13 Da
• Isoelectric Point: 6.8169

>NTDB_id=222633 C2H95_RS06810 WP_072175461.1 1328115..1329242(-) (rapC) [Bacillus subtilis strain PK5_17]
MGTISSPHVGIKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKVLPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFDDNLFKIMFEGLQALFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=222633 C2H95_RS06810 WP_072175461.1 1328115..1329242(-) (rapC) [Bacillus subtilis strain PK5_17]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATAAAAATTAATGAATGGAACCGGCATATTCAAAAGTTTAATGTGACAGA
TGCTGAAATGCTTAAAGCTGAGATCGAACGAGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAACTCGTTGAATACTACTATTACTTTTTTCAAGGGATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAACACCATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACACACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGAAACTA
CGACGATTTAGAAAGTCATGAAAAGGTGCTCCCTCACCTTGAACAGGCACTAAAAGGCGCACGGCTTCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATTCTCCAATTCAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGACGATA
ATCTATTTAAAATTATGTTTGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	38.786	100	0.392