Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | A6J46_RS12285 | Genome accession | NZ_CP020419 |
| Coordinates | 2094759..2095358 (+) | Length | 199 a.a. |
| NCBI ID | WP_003687354.1 | Uniprot ID | A0AA44U8R8 |
| Organism | Neisseria gonorrhoeae strain FDAARGOS_207 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2089759..2100358
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J46_RS12270 (A6J46_12295) | yihA | 2090344..2090973 (+) | 630 | WP_003687358.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| A6J46_RS12275 (A6J46_12300) | - | 2091093..2093489 (-) | 2397 | WP_003687357.1 | penicillin-binding protein 1A | - |
| A6J46_RS12280 (A6J46_12305) | pilM | 2093641..2094756 (+) | 1116 | WP_003696683.1 | type IV pilus biogenesis protein PilM | - |
| A6J46_RS12285 (A6J46_12310) | pilN | 2094759..2095358 (+) | 600 | WP_003687354.1 | PilN domain-containing protein | Machinery gene |
| A6J46_RS12290 (A6J46_12315) | - | 2095359..2096006 (+) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| A6J46_RS12295 (A6J46_12320) | pilP | 2096024..2096569 (+) | 546 | WP_003687351.1 | pilus assembly protein PilP | Machinery gene |
| A6J46_RS12300 (A6J46_12325) | pilQ | 2096588..2098759 (+) | 2172 | WP_105211416.1 | type IV pilus secretin PilQ | Machinery gene |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22183.53 Da Isoelectric Point: 9.8898
>NTDB_id=222596 A6J46_RS12285 WP_003687354.1 2094759..2095358(+) (pilN) [Neisseria gonorrhoeae strain FDAARGOS_207]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIGELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=222596 A6J46_RS12285 WP_003687354.1 2094759..2095358(+) (pilN) [Neisseria gonorrhoeae strain FDAARGOS_207]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
97.487 |
100 |
0.975 |