Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H93_RS15500 Genome accession   NZ_CP026036
Coordinates   3037372..3038085 (-) Length   237 a.a.
NCBI ID   WP_021480675.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_16     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3032372..3043085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H93_RS15480 (C2H93_15495) yvcT 3032516..3033493 (+) 978 WP_249852321.1 D-glycerate dehydrogenase -
  C2H93_RS15485 (C2H93_15500) psdB 3033531..3035471 (-) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  C2H93_RS15490 (C2H93_15505) psdA 3035446..3036225 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C2H93_RS15495 (C2H93_15510) psdS 3036308..3037378 (-) 1071 WP_021480674.1 two-component sensor histidine kinase PsdS -
  C2H93_RS15500 (C2H93_15515) braR 3037372..3038085 (-) 714 WP_021480675.1 two-component system response regulator PsdR Regulator
  C2H93_RS15505 (C2H93_15520) - 3038232..3038441 (+) 210 WP_021480676.1 hypothetical protein -
  C2H93_RS15510 (C2H93_15525) yvcN 3038477..3039241 (-) 765 WP_080286260.1 arylamine N-acetyltransferase -
  C2H93_RS15515 (C2H93_15530) crh 3039242..3039499 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C2H93_RS15520 (C2H93_15535) whiA 3039523..3040473 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  C2H93_RS15525 (C2H93_15540) mgfK 3040496..3041449 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  C2H93_RS15530 (C2H93_15545) rapZ 3041451..3042338 (-) 888 WP_003243903.1 RNase adapter RapZ -
  C2H93_RS15535 (C2H93_15550) yvcI 3042363..3042839 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27544.41 Da        Isoelectric Point: 4.6062

>NTDB_id=222554 C2H93_RS15500 WP_021480675.1 3037372..3038085(-) (braR) [Bacillus subtilis strain PK5_16]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNTPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=222554 C2H93_RS15500 WP_021480675.1 3037372..3038085(-) (braR) [Bacillus subtilis strain PK5_16]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGACCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATACGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment