Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   A6J44_RS08045 Genome accession   NZ_CP020418
Coordinates   1263759..1264220 (-) Length   153 a.a.
NCBI ID   WP_003688187.1    Uniprot ID   A0AA44U815
Organism   Neisseria gonorrhoeae strain FDAARGOS_205     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1258759..1269220
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J44_RS08015 (A6J44_07920) - 1259057..1260613 (+) 1557 WP_003693413.1 TerC family protein -
  A6J44_RS08020 (A6J44_07925) surE 1260630..1261376 (+) 747 WP_003688178.1 5'/3'-nucleotidase SurE -
  A6J44_RS08025 (A6J44_07930) - 1261478..1262491 (+) 1014 WP_025455948.1 peptidoglycan DD-metalloendopeptidase family protein -
  A6J44_RS08030 (A6J44_07935) - 1262889..1263371 (-) 483 WP_003688183.1 acyl-CoA thioesterase -
  A6J44_RS08040 (A6J44_07940) - 1263524..1263685 (-) 162 WP_010358395.1 hypothetical protein -
  A6J44_RS08045 (A6J44_07945) recX 1263759..1264220 (-) 462 WP_003688187.1 recombination regulator RecX Regulator
  A6J44_RS08050 (A6J44_07950) - 1264293..1265003 (-) 711 WP_003690977.1 phosphoglycolate phosphatase -
  A6J44_RS08060 (A6J44_07965) - 1265398..1266617 (+) 1220 Protein_1324 Glu/Leu/Phe/Val family dehydrogenase -
  A6J44_RS08065 (A6J44_07970) - 1266677..1267483 (-) 807 WP_003688191.1 DUF4198 domain-containing protein -
  A6J44_RS08070 (A6J44_07975) - 1267675..1267884 (+) 210 WP_003688192.1 4-oxalocrotonate tautomerase family protein -
  A6J44_RS08075 (A6J44_07980) - 1267973..1269187 (+) 1215 WP_033910216.1 pyridoxal phosphate-dependent aminotransferase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17745.13 Da        Isoelectric Point: 10.4361

>NTDB_id=222542 A6J44_RS08045 WP_003688187.1 1263759..1264220(-) (recX) [Neisseria gonorrhoeae strain FDAARGOS_205]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEKTSRNLLPDRSSEKQAAIAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=222542 A6J44_RS08045 WP_003688187.1 1263759..1264220(-) (recX) [Neisseria gonorrhoeae strain FDAARGOS_205]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAAAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAGCAAGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACATCCCGCCGCCAACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACAGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

100

100

1

Multiple sequence alignment