Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   A6J44_RS05220 Genome accession   NZ_CP020418
Coordinates   794211..796253 (+) Length   680 a.a.
NCBI ID   WP_010356693.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain FDAARGOS_205     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 789211..801253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J44_RS05195 (A6J44_05115) - 789696..790325 (+) 630 WP_003687375.1 response regulator transcription factor -
  A6J44_RS05200 (A6J44_05120) - 790407..791657 (+) 1251 WP_025455763.1 ATP-binding protein -
  A6J44_RS05205 (A6J44_05125) rng 791692..793185 (-) 1494 WP_003687377.1 ribonuclease G -
  A6J44_RS05210 (A6J44_05130) grxC 793404..793661 (+) 258 WP_003687379.1 glutaredoxin 3 -
  A6J44_RS05215 (A6J44_05135) secB 793682..794125 (+) 444 WP_003687381.1 protein-export chaperone SecB -
  A6J44_RS05220 (A6J44_05140) recG 794211..796253 (+) 2043 WP_010356693.1 ATP-dependent DNA helicase RecG Machinery gene
  A6J44_RS05235 (A6J44_05150) argC 796846..797889 (-) 1044 WP_003687386.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  A6J44_RS05240 (A6J44_05155) - 797886..798179 (-) 294 WP_002258326.1 hypothetical protein -
  A6J44_RS05250 (A6J44_05165) - 798431..799585 (+) 1155 WP_010359759.1 cupin domain-containing protein -
  A6J44_RS14605 (A6J44_05170) - 799594..799821 (+) 228 WP_025456393.1 hypothetical protein -
  A6J44_RS05260 (A6J44_05175) - 799896..800168 (+) 273 WP_226888059.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74896.96 Da        Isoelectric Point: 7.8477

>NTDB_id=222529 A6J44_RS05220 WP_010356693.1 794211..796253(+) (recG) [Neisseria gonorrhoeae strain FDAARGOS_205]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPRLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALRGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVCLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPEPNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=222529 A6J44_RS05220 WP_010356693.1 794211..796253(+) (recG) [Neisseria gonorrhoeae strain FDAARGOS_205]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGTCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATT
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCATTTTTACGCCAGCCATCAGAAGCAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGATTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCGCGCCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACTATTCATCAACTTTCAGACGGCACGCTGCCGGCGTGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGTTGTCCATGCGTTTGGCGCGGCAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGCGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCACAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCA
AAACCATCGTCGCCGCCTTATCCGCGCTGACCGCCATCGAATCAGGCGCGCAAGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAGCACTTCATCAAGTTCAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCTGCCTTTTTGGCAGTTT
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGAGCATTGTGGACGAACAGCACCGTTTCGGCGTTGCACAACGCCTC
GCACTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACACCCATCCCGCGCACGCTCGCCATGAGTTT
CTTCGCTGACTTGGACGTATCCGTCATCGACGAATTGCCGCCCGGGCGCACTCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCATATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACCCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCTGAAGTCATGGCGGAATTTGCCGCAGGCCGTCTGAACGTCT
TGGTTGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAACGCCGCCCTGATGGTGATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGCGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAATATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGCTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCTGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGTTATTTGGGTGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(469-575)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

98.088

100

0.981

Multiple sequence alignment