Detailed information NTG0222529

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C2H93_RS11690
• Genome accession: NZ_CP026036
• Coordinates: 2281526..2282791 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_16
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2276526..2287791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H93_RS11670 (C2H93_11665)	yrrB	2277897..2278517 (-)	621	WP_205764506.1	tetratricopeptide repeat protein	-
C2H93_RS11675 (C2H93_11670)	mnmA	2278603..2279718 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
C2H93_RS11680 (C2H93_11675)	iscSA	2279749..2280888 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
C2H93_RS11685 (C2H93_11680)	cymR	2280907..2281323 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
C2H93_RS11690 (C2H93_11685)	rarA	2281526..2282791 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
C2H93_RS11695 (C2H93_11690)	tcdA	2282831..2283595 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
C2H93_RS11705 (C2H93_11700)	aspS	2283930..2285708 (-)	1779	WP_172850093.1	aspartate--tRNA ligase	-
C2H93_RS11710 (C2H93_11705)	hisS	2285722..2286996 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
C2H93_RS11715 (C2H93_11710)	yrzK	2287378..2287548 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=222529 C2H93_RS11690 WP_014480427.1 2281526..2282791(+) (rarA) [Bacillus subtilis strain PK5_16]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=222529 C2H93_RS11690 WP_014480427.1 2281526..2282791(+) (rarA) [Bacillus subtilis strain PK5_16]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993