Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C2H93_RS07805 Genome accession   NZ_CP026036
Coordinates   1564141..1564758 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain PK5_16     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1559141..1569758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H93_RS07780 (C2H93_07795) yndJ 1559463..1561103 (+) 1641 WP_249852710.1 YndJ family protein -
  C2H93_RS07785 (C2H93_07800) - 1561193..1561507 (+) 315 WP_031314944.1 membrane protein -
  C2H93_RS07790 (C2H93_07805) pghL 1561731..1562489 (+) 759 WP_076458735.1 gamma-polyglutamate hydrolase PghL -
  C2H93_RS07795 (C2H93_07810) - 1562516..1562965 (-) 450 WP_015483284.1 YndM family protein -
  C2H93_RS07800 (C2H93_07815) fosB 1563172..1563604 (+) 433 Protein_1527 metallothiol transferase FosB -
  C2H93_RS07805 (C2H93_07825) dinR/lexA 1564141..1564758 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C2H93_RS07810 (C2H93_07830) yneA 1564908..1565225 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  C2H93_RS07815 (C2H93_07835) dinL 1565244..1565897 (+) 654 WP_003231596.1 recombinase family protein -
  C2H93_RS07820 (C2H93_07840) ynzC 1565961..1566194 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  C2H93_RS07825 (C2H93_07845) recP/tkt 1566363..1568366 (+) 2004 WP_014476936.1 transketolase Machinery gene
  C2H93_RS07830 (C2H93_07850) sirA 1568519..1568965 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C2H93_RS07835 (C2H93_07855) yneF 1569051..1569269 (+) 219 WP_003221221.1 YneF family protein -
  C2H93_RS07840 (C2H93_07860) ynzD 1569343..1569516 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=222501 C2H93_RS07805 WP_003238209.1 1564141..1564758(-) (dinR/lexA) [Bacillus subtilis strain PK5_16]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=222501 C2H93_RS07805 WP_003238209.1 1564141..1564758(-) (dinR/lexA) [Bacillus subtilis strain PK5_16]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCATC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATAGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1